LOCUS       BC026018                3424 bp    mRNA    linear   HUM 12-NOV-2003
DEFINITION  Homo sapiens laminin, beta 1, mRNA (cDNA clone IMAGE:3530032),
            partial cds.
ACCESSION   BC026018
VERSION     BC026018.2
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3424)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3424)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-MAR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Nov 6, 2003 this sequence version replaced BC026018.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Institute for Systems Biology
            http://www.systemsbiology.org
            contact: amadan@systemsbiology.org
            Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
            Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 11 Row: o Column: 19
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis.
FEATURES             Location/Qualifiers
     source          1..3424
                     /db_xref="H-InvDB:HIT000091158"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3530032"
                     /tissue_type="Muscle, rhabdomyosarcoma"
                     /clone_lib="NIH_MGC_17"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..3424
                     /gene="LAMB1"
                     /db_xref="GeneID:3912"
                     /db_xref="MIM:150240"
     CDS             <1..3254
                     /gene="LAMB1"
                     /codon_start=3
                     /product="LAMB1 protein"
                     /protein_id="AAH26018.2"
                     /db_xref="GeneID:3912"
                     /db_xref="MIM:150240"
                     /translation="LVLMPYCKSLDIFTVGGSGDGVVTNSAWETFQRYRCLENSRSVV
                     KTPMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNR
                     CAPGTFGFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS
                     CQPCQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPD
                     GPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCH
                     NNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQ
                     EHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPS
                     CNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCVC
                     VEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIAELTNRTHRFLEKAKALKISG
                     VIGPYRETVDSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEV
                     KLSDTTSQSNSTAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQM
                     SLEAEERVNASTTEPNSTVEQSALMRDRVEDVMMERESQFKEKQEEQARLLYELAGKL
                     QSLDLSAAAEMTCGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTVAHNAWQK
                     AMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR
                     NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEV
                     ILQHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQAD
                     EDIQGTQNLLTSIESETAASEETLFNASQRISELERNVEELKRKAAQNSGEAEYIEKV
                     VYTVKQSAEDVKKTLDGELDEKYKKVENLIAKKTEESADARRKAEMLQNEAKTLLAQA
                     NSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL"
     misc_feature    210..356
                     /gene="LAMB1"
                     /note="laminin_EGF; Region: Laminin EGF-like (Domains III
                     and V). This family is like pfam00008 but has 8 conserved
                     cysteines instead of 6"
                     /db_xref="CDD:pfam00053"
     misc_feature    642..812
                     /gene="LAMB1"
                     /note="laminin_EGF; Region: Laminin EGF-like (Domains III
                     and V). This family is like pfam00008 but has 8 conserved
                     cysteines instead of 6"
                     /db_xref="CDD:pfam00053"
     misc_feature    819..953
                     /gene="LAMB1"
                     /note="laminin_EGF; Region: Laminin EGF-like (Domains III
                     and V). This family is like pfam00008 but has 8 conserved
                     cysteines instead of 6"
                     /db_xref="CDD:pfam00053"
     misc_feature    975..1139
                     /gene="LAMB1"
                     /note="laminin_EGF; Region: Laminin EGF-like (Domains III
                     and V). This family is like pfam00008 but has 8 conserved
                     cysteines instead of 6"
                     /db_xref="CDD:pfam00053"
     misc_feature    1143..1289
                     /gene="LAMB1"
                     /note="laminin_EGF; Region: Laminin EGF-like (Domains III
                     and V). This family is like pfam00008 but has 8 conserved
                     cysteines instead of 6"
                     /db_xref="CDD:pfam00053"
     misc_feature    1575..3224
                     /gene="LAMB1"
                     /note="Myosin_tail; Region: Myosin tail. The myosin
                     molecule is a multi-subunit complex made up of two heavy
                     chains and four light chains it is a fundamental
                     contractile protein found in all eukaryote cell types.
                     This family consists of the coiled-coil myosin heavy chain
                     tail region. The coiled-coil is composed of the tail from
                     two molecules of myosin. These can then assemble into the
                     macromolecular thick filament. The coiled-coil region
                     provides the structural backbone the thick filament"
                     /db_xref="CDD:pfam01576"
BASE COUNT         1015 a          758 c          912 g          739 t
ORIGIN      
        1 ctcttgttct catgccatac tgtaaatcac tggacatctt caccgtggga ggttcaggag
       61 atggggtggt caccaacagt gcctgggaaa cctttcagag ataccgatgt ctagagaaca
      121 gcagaagcgt tgtgaaaaca ccgatgacag atgtttgcag aaacatcatc tttagcattt
      181 ctgccctgtt acaccagaca ggcctggctt gtgaatgcga ccctcagggt tcgttaagtt
      241 ccgtgtgtga tcccaacgga ggccagtgcc agtgccggcc caacgtggtt ggaagaacct
      301 gcaacagatg tgcacctgga acttttggct ttggccccag tggatgcaaa ccttgtgagt
      361 gccatctgca aggatctgtc aatgccttct gcaatcccgt cactggccag tgccactgtt
      421 tccagggagt gtatgctcgg cagtgtgatc ggtgcttacc tgggcactgg ggctttccaa
      481 gttgccagcc ctgccagtgc aatggccacg ccgatgactg cgacccagtg actggggagt
      541 gcttgaactg ccaggactac accatgggtc ataactgtga aaggtgcttg gctggttact
      601 atggcgaccc catcattggg tcaggagatc actgccgccc ttgcccttgc ccagatggtc
      661 ccgacagtgg acgccagttt gccaggagct gctaccaaga tcctgttact ttacagcttg
      721 cctgtgtttg tgatcctgga tacattggtt ccagatgtga cgactgtgcc tcaggatact
      781 ttggcaatcc atcagaagtt ggggggtcgt gtcagccttg ccagtgtcac aacaacattg
      841 acacgacaga cccagaagcc tgtgacaagg agactgggag gtgtctcaag tgcctgtacc
      901 acacggaagg ggaacactgt cagttctgcc ggtttggata ctatggtgat gccctccagc
      961 aggactgtcg aaagtgtgtc tgtaattacc tgggcaccgt gcaagagcac tgtaacggct
     1021 ctgactgcca gtgcgacaaa gccactggtc agtgcttgtg tcttcctaat gtgatcgggc
     1081 agaactgtga ccgctgtgcg cccaatacct ggcagctggc cagtggcact ggctgtgacc
     1141 catgcaactg caatgctgct cattccttcg ggccatcttg caatgagttc acggggcagt
     1201 gccagtgcat gcctgggttt ggaggccgca cctgcagcga gtgccaggaa ctcttctggg
     1261 gagaccccga cgtggagtgc cgagcctgtg actgtgaccc caggggcatt gagacgccac
     1321 agtgtgacca gtccacgggc cagtgtgtct gcgttgaggg tgttgagggt ccacgctgtg
     1381 acaagtgcac gcgagggtac tcgggggtct tccctgactg cacaccctgc caccagtgct
     1441 ttgctctctg ggatgtgatc attgccgagc tgaccaacag gacacacaga ttcctggaga
     1501 aagccaaggc cttgaagatc agtggtgtga tcgggcctta ccgtgagact gtggactcgg
     1561 tggagaggaa agtcagcgag ataaaagaca tcctggcgca gagccccgca gcagagccac
     1621 tgaaaaacat tgggaatctc tttgaggaag cagagaaact gattaaagat gttacagaaa
     1681 tgatggctca agtagaagtg aaattatctg acacaacttc ccaaagcaac agcacagcca
     1741 aagaactgga ttctctacag acagaagccg aaagcctaga caacactgtg aaagaacttg
     1801 ctgaacaact ggaatttatc aaaaactcag atattcgggg tgccttggat agcattacca
     1861 agtatttcca gatgtctctt gaggcagagg agagggtgaa tgcctccacc acagaaccca
     1921 acagcactgt ggagcagtca gccctcatga gagacagagt agaagacgtg atgatggagc
     1981 gagaatccca gttcaaggaa aaacaagagg agcaggctcg cctcctttat gaactggcag
     2041 gcaagctaca aagcctagac ctttcagccg ctgccgaaat gacctgtgga acacccccag
     2101 gggcctcctg ttccgagact gaatgtggcg ggccaaactg cagaactgac gaaggagaga
     2161 ggaagtgtgg ggggcctggc tgtggtggtc tggttactgt tgcacacaac gcctggcaga
     2221 aagccatgga cttggaccaa gatgtcctga gtgccctggc tgaagtggaa cagctctcca
     2281 agatggtctc tgaagcaaaa ctgagggcag atgaggcaaa acaaagtgct gaagacattc
     2341 tgttgaagac aaatgctacc aaagaaaaaa tggacaagag caatgaggag ctgagaaatc
     2401 taatcaagca aatcagaaac tttttgaccc aggatagtgc tgatttggac agcattgaag
     2461 cagttgctaa tgaagtattg aaaatggaga tgcctagcac cccacagcag ttacagaact
     2521 tgacagaaga tatacgtgaa cgagttgaaa gcctttctca agtagaggtt attcttcagc
     2581 atagtgctgc tgacattgcc agagctgaga tgttgttaga agaagctaaa agagcaagca
     2641 aaagtgcaac agatgttaaa gtcactgcag atatggtaaa ggaagctctg gaagaagcag
     2701 aaaaggccca ggtcgcagca gagaaggcaa ttaaacaagc agatgaagac attcaaggaa
     2761 cccagaacct gttaacttcg attgagtctg aaacagcagc ttctgaggaa accttgttca
     2821 acgcgtccca gcgcatcagc gagttagaga ggaatgtgga agaacttaag cggaaagctg
     2881 cccaaaactc cggggaggca gaatatattg aaaaagtagt atatactgtg aagcaaagtg
     2941 cagaagatgt taagaagact ttagatggtg aacttgatga aaagtataaa aaagtagaaa
     3001 atttaattgc caaaaaaact gaagagtcag ctgatgccag aaggaaagcc gaaatgctac
     3061 aaaatgaagc aaaaactctt ttagctcaag caaatagcaa gctgcaactg ctcaaagatt
     3121 tagaaagaaa atatgaagac aatcaaagat acttagaaga taaagctcaa gaattagcaa
     3181 gactggaagg agaagtccgt tcactcctaa aggatataag ccagaaagtt gctgtgtata
     3241 gcacatgctt gtaacagagg agaataaaaa atggctgagg tgaacaaggt aaaacaacta
     3301 cattttaaaa actgacttaa tgctcttcaa aataaaacat cacctattta atgtttttaa
     3361 tcacattttg tatggagtta aataaagtac agtgcttttg tataaaaaaa aaaaaaaaaa
     3421 aaaa
//