LOCUS BC026018 3424 bp mRNA linear HUM 12-NOV-2003 DEFINITION Homo sapiens laminin, beta 1, mRNA (cDNA clone IMAGE:3530032), partial cds. ACCESSION BC026018 VERSION BC026018.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3424) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3424) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Nov 6, 2003 this sequence version replaced BC026018.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 11 Row: o Column: 19 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..3424 /db_xref="H-InvDB:HIT000091158" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3530032" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..3424 /gene="LAMB1" /db_xref="GeneID:3912" /db_xref="MIM:150240" CDS <1..3254 /gene="LAMB1" /codon_start=3 /product="LAMB1 protein" /protein_id="AAH26018.2" /db_xref="GeneID:3912" /db_xref="MIM:150240" /translation="LVLMPYCKSLDIFTVGGSGDGVVTNSAWETFQRYRCLENSRSVV KTPMTDVCRNIIFSISALLHQTGLACECDPQGSLSSVCDPNGGQCQCRPNVVGRTCNR CAPGTFGFGPSGCKPCECHLQGSVNAFCNPVTGQCHCFQGVYARQCDRCLPGHWGFPS CQPCQCNGHADDCDPVTGECLNCQDYTMGHNCERCLAGYYGDPIIGSGDHCRPCPCPD GPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDDCASGYFGNPSEVGGSCQPCQCH NNIDTTDPEACDKETGRCLKCLYHTEGEHCQFCRFGYYGDALQQDCRKCVCNYLGTVQ EHCNGSDCQCDKATGQCLCLPNVIGQNCDRCAPNTWQLASGTGCDPCNCNAAHSFGPS CNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIETPQCDQSTGQCVC VEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIAELTNRTHRFLEKAKALKISG VIGPYRETVDSVERKVSEIKDILAQSPAAEPLKNIGNLFEEAEKLIKDVTEMMAQVEV KLSDTTSQSNSTAKELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDSITKYFQM SLEAEERVNASTTEPNSTVEQSALMRDRVEDVMMERESQFKEKQEEQARLLYELAGKL QSLDLSAAAEMTCGTPPGASCSETECGGPNCRTDEGERKCGGPGCGGLVTVAHNAWQK AMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEV ILQHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQAD EDIQGTQNLLTSIESETAASEETLFNASQRISELERNVEELKRKAAQNSGEAEYIEKV VYTVKQSAEDVKKTLDGELDEKYKKVENLIAKKTEESADARRKAEMLQNEAKTLLAQA NSKLQLLKDLERKYEDNQRYLEDKAQELARLEGEVRSLLKDISQKVAVYSTCL" misc_feature 210..356 /gene="LAMB1" /note="laminin_EGF; Region: Laminin EGF-like (Domains III and V). This family is like pfam00008 but has 8 conserved cysteines instead of 6" /db_xref="CDD:pfam00053" misc_feature 642..812 /gene="LAMB1" /note="laminin_EGF; Region: Laminin EGF-like (Domains III and V). This family is like pfam00008 but has 8 conserved cysteines instead of 6" /db_xref="CDD:pfam00053" misc_feature 819..953 /gene="LAMB1" /note="laminin_EGF; Region: Laminin EGF-like (Domains III and V). This family is like pfam00008 but has 8 conserved cysteines instead of 6" /db_xref="CDD:pfam00053" misc_feature 975..1139 /gene="LAMB1" /note="laminin_EGF; Region: Laminin EGF-like (Domains III and V). This family is like pfam00008 but has 8 conserved cysteines instead of 6" /db_xref="CDD:pfam00053" misc_feature 1143..1289 /gene="LAMB1" /note="laminin_EGF; Region: Laminin EGF-like (Domains III and V). This family is like pfam00008 but has 8 conserved cysteines instead of 6" /db_xref="CDD:pfam00053" misc_feature 1575..3224 /gene="LAMB1" /note="Myosin_tail; Region: Myosin tail. The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament" /db_xref="CDD:pfam01576" BASE COUNT 1015 a 758 c 912 g 739 t ORIGIN 1 ctcttgttct catgccatac tgtaaatcac tggacatctt caccgtggga ggttcaggag 61 atggggtggt caccaacagt gcctgggaaa cctttcagag ataccgatgt ctagagaaca 121 gcagaagcgt tgtgaaaaca ccgatgacag atgtttgcag aaacatcatc tttagcattt 181 ctgccctgtt acaccagaca ggcctggctt gtgaatgcga ccctcagggt tcgttaagtt 241 ccgtgtgtga tcccaacgga ggccagtgcc agtgccggcc caacgtggtt ggaagaacct 301 gcaacagatg tgcacctgga acttttggct ttggccccag tggatgcaaa ccttgtgagt 361 gccatctgca aggatctgtc aatgccttct gcaatcccgt cactggccag tgccactgtt 421 tccagggagt gtatgctcgg cagtgtgatc ggtgcttacc tgggcactgg ggctttccaa 481 gttgccagcc ctgccagtgc aatggccacg ccgatgactg cgacccagtg actggggagt 541 gcttgaactg ccaggactac accatgggtc ataactgtga aaggtgcttg gctggttact 601 atggcgaccc catcattggg tcaggagatc actgccgccc ttgcccttgc ccagatggtc 661 ccgacagtgg acgccagttt gccaggagct gctaccaaga tcctgttact ttacagcttg 721 cctgtgtttg tgatcctgga tacattggtt ccagatgtga cgactgtgcc tcaggatact 781 ttggcaatcc atcagaagtt ggggggtcgt gtcagccttg ccagtgtcac aacaacattg 841 acacgacaga cccagaagcc tgtgacaagg agactgggag gtgtctcaag tgcctgtacc 901 acacggaagg ggaacactgt cagttctgcc ggtttggata ctatggtgat gccctccagc 961 aggactgtcg aaagtgtgtc tgtaattacc tgggcaccgt gcaagagcac tgtaacggct 1021 ctgactgcca gtgcgacaaa gccactggtc agtgcttgtg tcttcctaat gtgatcgggc 1081 agaactgtga ccgctgtgcg cccaatacct ggcagctggc cagtggcact ggctgtgacc 1141 catgcaactg caatgctgct cattccttcg ggccatcttg caatgagttc acggggcagt 1201 gccagtgcat gcctgggttt ggaggccgca cctgcagcga gtgccaggaa ctcttctggg 1261 gagaccccga cgtggagtgc cgagcctgtg actgtgaccc caggggcatt gagacgccac 1321 agtgtgacca gtccacgggc cagtgtgtct gcgttgaggg tgttgagggt ccacgctgtg 1381 acaagtgcac gcgagggtac tcgggggtct tccctgactg cacaccctgc caccagtgct 1441 ttgctctctg ggatgtgatc attgccgagc tgaccaacag gacacacaga ttcctggaga 1501 aagccaaggc cttgaagatc agtggtgtga tcgggcctta ccgtgagact gtggactcgg 1561 tggagaggaa agtcagcgag ataaaagaca tcctggcgca gagccccgca gcagagccac 1621 tgaaaaacat tgggaatctc tttgaggaag cagagaaact gattaaagat gttacagaaa 1681 tgatggctca agtagaagtg aaattatctg acacaacttc ccaaagcaac agcacagcca 1741 aagaactgga ttctctacag acagaagccg aaagcctaga caacactgtg aaagaacttg 1801 ctgaacaact ggaatttatc aaaaactcag atattcgggg tgccttggat agcattacca 1861 agtatttcca gatgtctctt gaggcagagg agagggtgaa tgcctccacc acagaaccca 1921 acagcactgt ggagcagtca gccctcatga gagacagagt agaagacgtg atgatggagc 1981 gagaatccca gttcaaggaa aaacaagagg agcaggctcg cctcctttat gaactggcag 2041 gcaagctaca aagcctagac ctttcagccg ctgccgaaat gacctgtgga acacccccag 2101 gggcctcctg ttccgagact gaatgtggcg ggccaaactg cagaactgac gaaggagaga 2161 ggaagtgtgg ggggcctggc tgtggtggtc tggttactgt tgcacacaac gcctggcaga 2221 aagccatgga cttggaccaa gatgtcctga gtgccctggc tgaagtggaa cagctctcca 2281 agatggtctc tgaagcaaaa ctgagggcag atgaggcaaa acaaagtgct gaagacattc 2341 tgttgaagac aaatgctacc aaagaaaaaa tggacaagag caatgaggag ctgagaaatc 2401 taatcaagca aatcagaaac tttttgaccc aggatagtgc tgatttggac agcattgaag 2461 cagttgctaa tgaagtattg aaaatggaga tgcctagcac cccacagcag ttacagaact 2521 tgacagaaga tatacgtgaa cgagttgaaa gcctttctca agtagaggtt attcttcagc 2581 atagtgctgc tgacattgcc agagctgaga tgttgttaga agaagctaaa agagcaagca 2641 aaagtgcaac agatgttaaa gtcactgcag atatggtaaa ggaagctctg gaagaagcag 2701 aaaaggccca ggtcgcagca gagaaggcaa ttaaacaagc agatgaagac attcaaggaa 2761 cccagaacct gttaacttcg attgagtctg aaacagcagc ttctgaggaa accttgttca 2821 acgcgtccca gcgcatcagc gagttagaga ggaatgtgga agaacttaag cggaaagctg 2881 cccaaaactc cggggaggca gaatatattg aaaaagtagt atatactgtg aagcaaagtg 2941 cagaagatgt taagaagact ttagatggtg aacttgatga aaagtataaa aaagtagaaa 3001 atttaattgc caaaaaaact gaagagtcag ctgatgccag aaggaaagcc gaaatgctac 3061 aaaatgaagc aaaaactctt ttagctcaag caaatagcaa gctgcaactg ctcaaagatt 3121 tagaaagaaa atatgaagac aatcaaagat acttagaaga taaagctcaa gaattagcaa 3181 gactggaagg agaagtccgt tcactcctaa aggatataag ccagaaagtt gctgtgtata 3241 gcacatgctt gtaacagagg agaataaaaa atggctgagg tgaacaaggt aaaacaacta 3301 cattttaaaa actgacttaa tgctcttcaa aataaaacat cacctattta atgtttttaa 3361 tcacattttg tatggagtta aataaagtac agtgcttttg tataaaaaaa aaaaaaaaaa 3421 aaaa //