LOCUS BC025957 2060 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens transmembrane emp24 domain trafficking protein 2, mRNA
(cDNA clone MGC:39201 IMAGE:5020405), complete cds.
ACCESSION BC025957
VERSION BC025957.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2060)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2060)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: m Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314646.
FEATURES Location/Qualifiers
source 1..2060
/db_xref="H-InvDB:HIT000040040"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39201 IMAGE:5020405"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2060
/gene="TMED2"
/gene_synonym="P24A"
/gene_synonym="RNP24"
/db_xref="GeneID:10959"
/db_xref="HGNC:HGNC:16996"
CDS 24..629
/gene="TMED2"
/gene_synonym="P24A"
/gene_synonym="RNP24"
/codon_start=1
/product="transmembrane emp24 domain trafficking protein
2"
/protein_id="AAH25957.1"
/db_xref="GeneID:10959"
/db_xref="HGNC:HGNC:16996"
/translation="MVTLAELLVLLAALLATVSGYFVSIDAHAEECFFERVTSGTKMG
LIFEVAEGGFLDIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMT
PKIVMFTIDIGEAPKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRA
INDNTNSRVVLWSFFEALVLVAMTLGQIYYLKRFFEVRRVV"
BASE COUNT 573 a 389 c 417 g 681 t
ORIGIN
1 ctggcttcgg cctcagcccc accatggtga cgcttgctga actgctggtg ctcctggccg
61 ctctcctggc cacggtctcg ggctatttcg ttagcatcga cgcccatgct gaagagtgct
121 tctttgagcg ggtcacctcg ggcaccaaga tgggcctcat cttcgaggtg gcggagggcg
181 gcttcctgga catcgacgtg gagattacag gaccagataa caaaggaatt tacaaaggag
241 acagagaatc cagtgggaaa tacacatttg ctgctcacat ggatggaaca tacaaatttt
301 gttttagtaa ccggatgtcc accatgactc caaaaatagt gatgttcacc attgatattg
361 gggaggctcc aaaaggacaa gatatggaaa cagaagctca ccagaacaag ctagaagaaa
421 tgatcaatga gctagcagtg gcgatgacag ctgtaaagca cgaacaggaa tacatggaag
481 tccgggagag aatacacaga gccatcaacg acaacacaaa cagcagagtg gtcctttggt
541 ccttctttga agctcttgtt ctagttgcca tgacattggg acagatctac tacctgaaga
601 gattttttga agtccggaga gttgtttaaa aagcctcttc ctgatgatcc caactcagaa
661 ttcactgttt accaaacacc ttggtcataa taatgtcatt agtttctcca tttttatttt
721 ctgaactgta cattcacaac ttatgtttct ttgagattaa tagatattgg gggaaaaacg
781 cctttttagg aaaattatag tgaaaatttg acagttgatt ggcataattt cttgtttgaa
841 tgctgcctcc attatatagg tccttccagg aactcaaaca ctgtaagtga aatatgggag
901 tatagttttt attatttctt cttttccttt tgttttcata atataatgca gtttgttcag
961 gaaatcagca caaagcctga tagtacttta ctaaaatgac tgcattcttt ggattccttc
1021 agtctatggt tcaagtcact aaagattcat ttttgttgag tccttatgag aaacagcagt
1081 atgaatcttg acggtttctg cccgtcctaa tggcagagct ctctgacttg ggtgtatgct
1141 gccaggctgg gtactttcat actttgtttt cttgttttgc tttaaaacta cgactcagca
1201 tacattttcc cacatacatt tttacattgt accttaggac tcagtcatct ccacttaaat
1261 tgatgacaca agcagctaat aaccatttct gggtttctgc ctaaccccct aattgtctgt
1321 taaagccaat tctctgggtg tcccagtgag tggtggcttt ttttctttcc acattggcac
1381 attcacttct cccactcttg gcatgtaaga aataagcatt tacataattg gaaaaatctg
1441 gatttctgat gccaaagggt taaagcttct tggatttcat ttcattgata tacagccact
1501 attttatttt tgatcagtgg cctttgggcc actgttcagg gtactgacca tcagtgtcag
1561 cattagggtt ttggtttttg tttcttttgg gtatttcttt tttggcacat gtgaatcttg
1621 ttttgtgtaa aatgaaatta ctttctcttg ttctctgatg atgggtttaa aattaaaaga
1681 gcatccggtt ttggtatggg gatgatccag gattatgttg tgactgatac atattagtta
1741 cttgtgcttt tttttttttt ttttggatct ttgcaagggc aaaactacaa gtaacgagtt
1801 ttatataatt aatttaaatt tgttacaggt tttcatgttc aggataaacc atacttccac
1861 cttgggtgag aacacttgca acagtttatt aatgaggtga ctttcacctt aggacaactg
1921 ttgcatgcca agttttttgt gtgtgtgaaa cacttcaaaa ctgatttaaa agatgtaaat
1981 ttaaaattgg ttgtatctaa tatgccccag gttcggtaaa taaacaattc tttttaaaaa
2041 aaaaaaaaaa aaaaaaaaaa
//