LOCUS BC025950 1124 bp mRNA linear HUM 22-SEP-2005
DEFINITION Homo sapiens chromosome 18 open reading frame 21, mRNA (cDNA clone
IMAGE:3626034), partial cds.
ACCESSION BC025950
VERSION BC025950.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1124)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1124)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: a Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361962.
FEATURES Location/Qualifiers
source 1..1124
/db_xref="H-InvDB:HIT000040035"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3626034"
/tissue_type="Uterus, endometrium adenocarcinoma"
/clone_lib="NIH_MGC_44"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1124
/gene="C18orf21"
/gene_synonym="HsT3108"
/gene_synonym="PNAS-124"
/gene_synonym="PNAS-131"
/gene_synonym="XTP13"
/db_xref="GeneID:83608"
CDS <1..686
/gene="C18orf21"
/gene_synonym="HsT3108"
/gene_synonym="PNAS-124"
/gene_synonym="PNAS-131"
/gene_synonym="XTP13"
/codon_start=3
/product="C18orf21 protein"
/protein_id="AAH25950.2"
/db_xref="GeneID:83608"
/translation="AKPATSCKRTGGEAGGERVGVPLLLTSLFLFYSWAYTSSHDDKS
TFEETCPYCFQLLVLDNSRVRLKPKARLTPKIQKLLNREARNYTLSFKEAKMVKKFKD
SKSVLLITCKTCNRTVKHHGKSRSFVSTLKSNPATPASKLSLKTPERRTANPNHDMSG
SKGKSPASVFRTPTSGQSVSTCSSKNTSKTKKHFSQLKMLLSQNESQKIPKVDFRNFL
SSLKGGLLK"
BASE COUNT 489 a 196 c 187 g 252 t
ORIGIN
1 gggccaagcc cgctacctcc tgtaagagga ctggagggga agcgggaggc gagcgggtag
61 gtgttccttt gctcctcaca agtctctttc tcttttacag ctgggcctac acttcgtcgc
121 acgatgataa gagcactttt gaagaaacgt gtccatactg tttccagctg ttggttctgg
181 ataactctcg agtgcgtctc aaacccaaag ccaggttgac acccaaaata cagaaacttc
241 ttaatcgaga agcgagaaac tatacactca gttttaaaga agcaaaaatg gtgaaaaagt
301 tcaaagactc caaaagtgta ttgttgatca cttgtaaaac atgcaacaga acagtgaaac
361 atcatggtaa aagtagaagc tttgtgtcaa cattgaagag caatcctgcc actcctgcaa
421 gtaaactcag cctgaagaca ccagagagaa ggactgcaaa cccaaatcat gacatgtctg
481 gctcgaaagg caagagccca gcatcggttt tcagaacacc tacatctgga cagtcagtat
541 ctacttgctc ctcaaagaac accagcaaaa caaagaaaca cttctctcaa ctaaaaatgt
601 tacttagtca gaatgaatcc caaaagattc caaaggtgga cttcagaaat ttcttatctt
661 ctctgaaggg tggactttta aaataagaaa tgcctgatgt caattctgaa actaaagttg
721 gtaaaacaac tttttaaact cttattcatt ttttgaatac atggaaacta gatctgaatg
781 caaacttttc ttggcatcct tcagtgttta tggggaaaat acctcattag tgtgaatacc
841 tgaaacctgc ctacctcata ggacagctgt gaggatcaaa aaatatatga aagttccttg
901 tagatacata tctatagata tatatgtgta tgtatataaa gatagatata tacattgaaa
961 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1081 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//