LOCUS BC025930 2685 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens nuclear protein localization 4 homolog (S.
cerevisiae), mRNA (cDNA clone MGC:31840 IMAGE:5017718), complete
cds.
ACCESSION BC025930
VERSION BC025930.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2685)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2685)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 40 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923608.
FEATURES Location/Qualifiers
source 1..2685
/db_xref="H-InvDB:HIT000040033"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:31840 IMAGE:5017718"
/tissue_type="Pancreas, epithelioid carcinoma"
/clone_lib="NIH_MGC_42"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2685
/gene="NPLOC4"
/gene_synonym="FLJ20657"
/gene_synonym="KIAA1499"
/gene_synonym="NPL4"
/db_xref="GeneID:55666"
/db_xref="HGNC:HGNC:18261"
/db_xref="MIM:606590"
CDS 165..1991
/gene="NPLOC4"
/gene_synonym="FLJ20657"
/gene_synonym="KIAA1499"
/gene_synonym="NPL4"
/codon_start=1
/product="nuclear protein localization 4 homolog (S.
cerevisiae)"
/protein_id="AAH25930.1"
/db_xref="GeneID:55666"
/db_xref="HGNC:HGNC:18261"
/db_xref="MIM:606590"
/translation="MAESIIIRVQSPDGVKRITATKRETAATFLKKVAKEFGFQNNGF
SVYINRNKTGEITASSNKSLNLLKIKHGDLLFLFPSSLAGPSSEMETSVPPGFKVFGA
PNVVEDEIDQYLSKQDGKIYRSRDPQLCRHGPLGKCVHCVPLEPFDEDYLNHLEPPVK
HMSFHAYIRKLTGGADKGKFVALENISCKIKSGCEGHLPWPNGICTKCQPSAITLNRQ
KYRHVDNIMFENHTVADRFLDFWRKTGNQHFGYLYGRYTEHKDIPLGIRAEVAAIYEP
PQIGTQNSLELLEDPKAEVVDEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTY
FLSSEECITAGDFQNKHPNMCRLSPDGHFGSKFVTAVATGGPDNQVHFEGYQVSNQCM
ALVRDECLLPCKDAPELGYAKESSSEQYVPDVFYKDVDKFGNEITQLARPLPVEYLII
DITTTFPKDPVYTFSISQNPFPIENRDVLGETQDFHSLATYLSQNTSSVFLDTISDFH
LLLFLVTNEVMPLQDSISLLLEAVRTRNEELAQTWKRSEQWATIEQLCSTVGGQLPGL
HEYGAVGGSTHTATAAMWACQHCTFMNQPGTGHCEMCSLPRT"
BASE COUNT 624 a 734 c 746 g 581 t
ORIGIN
1 ggacgtcggc ggctggcgga gccgggcggg cgaagctgga gcggcggtgg cggcggcgta
61 gggaggccgg ggccggggct gaggccgcgg ccgggtctgc gaggcccttg gggcggcagg
121 cggcggcggc ccggggctcg agcccggagg caggagcagc cgccatggcc gagagcatca
181 taattcgtgt ccagtccccg gatggagtga agcggatcac agcaacaaag agagaaacag
241 cagcaacatt tttgaaaaag gttgcaaagg agtttggctt ccaaaataat ggcttctcgg
301 tttacatcaa tagaaacaag accggagaga taacagcctc ctccaacaaa tccctcaact
361 tgctaaaaat caagcatggc gatttgttgt tcctgtttcc ctcgagcctt gctgggccct
421 catctgaaat ggagacttca gttccaccgg gcttcaaagt ctttggcgct cccaacgtgg
481 tggaggatga gattgatcag tacctcagca aacaggacgg gaagatttac agaagccgag
541 acccacagct atgccgccac ggccctttgg ggaaatgcgt gcactgcgtc cctctagagc
601 cattcgatga ggactatcta aaccatctcg agcctcccgt gaagcacatg tccttccacg
661 cctacatccg gaagctgact ggaggggctg acaaggggaa gtttgttgcc ctggagaaca
721 tcagctgcaa gattaagtca gggtgcgagg ggcacctccc gtggccgaat ggcatctgta
781 ctaagtgcca gccgagcgcc atcacgctga acagacagaa gtacaggcat gtggacaata
841 tcatgtttga gaatcacacc gtcgctgacc gctttcttga cttctggaga aagacaggga
901 accagcattt tgggtactta tacggacggt acacggagca caaagacatt ccccttggca
961 tcagggctga agtggctgcg atttatgagc cacctcagat tggtacacag aacagcttgg
1021 agcttcttga ggatccaaaa gctgaagtgg tcgatgaaat tgctgccaaa cttggcctgc
1081 ggaaggttgg ctggatattt acagacctcg tctcagaaga tacccgaaag ggtaccgtcc
1141 gctacagtcg aaataaggac acctatttcc taagttcaga agagtgcatc actgcaggag
1201 acttccagaa caagcatccc aacatgtgcc ggctctctcc agacggacat tttggatcca
1261 agtttgttac tgcagtggct acaggtggtc ctgacaacca agtccacttt gaagggtacc
1321 aggtgtccaa tcagtgtatg gcactggtcc gtgatgagtg tttgctgcca tgcaaggacg
1381 ccccggagct tggctacgcc aaggagtcta gcagtgagca gtacgtgcct gatgtgtttt
1441 ataaggacgt agacaagttt ggcaacgaga tcacccagct ggcccgtccc ctgcctgtgg
1501 agtatctcat catagacatc acaacaactt tccccaagga tccagtttac actttttcta
1561 tttcgcaaaa tccatttcct attgaaaacc gggatgtatt gggtgagaca caggacttcc
1621 atagcttggc cacctatttg tctcagaata cctcatctgt gttcttggat accatctcag
1681 atttccacct cttgctgttc ctggtcacca atgaagttat gcctctgcag gacagcatca
1741 gcttgctgct ggaggccgtg cggaccagaa atgaggagct cgcccagaca tggaagaggt
1801 ctgagcagtg ggccaccatc gagcagctgt gcagcacagt tggcgggcag ctcccaggtc
1861 tccatgagta cggggccgtc gggggctcca cacacacggc cactgcagcc atgtgggcct
1921 gtcagcactg cacgttcatg aaccagccag gcacaggcca ctgcgagatg tgcagcctcc
1981 ccaggaccta gggcgcctgc cctctgctgg ctaggaccgg gcccagccca gcccttcctg
2041 aagccagaag cgttgctgag tgtgttccct gtaactgccc catagtgggc agccctggag
2101 gaacaagggg ctggctgtcc tgggctccct gacccactga agcttctcag cacgttcctc
2161 cctggagagc gggcgccacg gctggtattc tgcaggctga atgcagtctc cagactggaa
2221 acgcagagcg gctcctcacg cctaatcctg ttgacaagtc ccccgccgtg ttggaaagac
2281 ctctcgcctc tacgtggcac ctggaattgg ggcgcacagg gaggggcgga tgctgccacc
2341 acccagcctt ctctttattt tcagtgcttt ttgtttggcc tccctgcccc catgtttttc
2401 tggctgggag ctcctggtta cccccttgtc tgactgcttg gtggcaggca ccctgcctgt
2461 gagggccact ttcctcttct agtagctgtt gtctggtggg gacgcagtgg ccctggacac
2521 ggctcccctc tgcaggtctg caggtcggtt tgctgcctgc cctcctcctc tcacccgatg
2581 tccaggtggg attttaaagt ctgcattggt tataataaca gttatcagta attcctgccc
2641 agaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//