LOCUS BC025926 3464 bp mRNA linear HUM 20-DEC-2004 DEFINITION Homo sapiens nicalin homolog (zebrafish), mRNA (cDNA clone MGC:15864 IMAGE:3509966), complete cds. ACCESSION BC025926 VERSION BC025926.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3464) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3464) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (18-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 23 Row: g Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..3464 /db_xref="H-InvDB:HIT000040031" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15864 IMAGE:3509966" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3464 /gene="NCLN" /db_xref="GeneID:56926" CDS 100..1755 /gene="NCLN" /codon_start=1 /product="NCLN protein" /protein_id="AAH25926.1" /db_xref="GeneID:56926" /translation="MLKASCLPLGFIVFLPAVLLLVAPPLPAADAAHEFTVYRMQQYD LQGQPYGTRNAVLNTEARTMAAEVLSRRCVLMRLLDFSYEQYQKALRQSAGAVVIILP RAMAAVPQDVVRQFMEIEPEMLAMETAVPVYFAVEDEALLSIYKQTQAASASQGSASA AEVLLRTATANGFQMVTSGVQSKAVSDWLIASVEGRLTGLGGEDLPTIVIVAHYDAFG VAPWLSLGADSNGSGVSVLLELARLFSRLYTYKRTHAAYNLLFFASGGGKFNYQGTKR WLEDNLDHTDSSLLQDNVAFVLCLDTVGRGSSLHLHVSKPPREGTLQHAFLRELETVA AHQFPEVRFSMVHKRINLAEDVLAWEHERFAIRRLPAFTLSHLESHRDGQRSSIMDVR SRVDSKTLTRNTRIIAEALTRVIYNLTEKGTPPDMPVFTEQMIQQEQLDSVMDWLTNQ PRAAQLVDKDSTFLSTLEHHLSRYLKDVKQHHVKADKRDPEFVFYDQLKQVMNAYRVK PAVFDLLLAVGIAAYLGMAYVAVQHFSLLYKTVQRLLVKAKTQ" BASE COUNT 579 a 1166 c 1077 g 642 t ORIGIN 1 gcgggagccg ccgccgccgc cgtcccgtcc cagctgccgc cccgcgcggc cccgccgccg 61 gccaggatgc tggaggaagc gggcgaggtg ctggagaaca tgctgaaggc gtcttgtctg 121 cctctcggct tcatcgtctt cctgcccgct gtgctgctgc tggtggcgcc gccgctgcct 181 gccgccgacg ccgcgcacga gttcaccgtg taccgcatgc agcagtacga cctgcagggc 241 cagccctacg gcacacggaa tgcagtgctg aacacggagg cgcgcacgat ggcggcggag 301 gtgctgagcc gccgctgcgt gctcatgcgg ctactggact tctcctacga gcagtaccag 361 aaggccctgc ggcagtcggc gggcgccgtg gtcatcatcc tgcccagggc catggccgcc 421 gtgccccagg acgtcgtccg gcaattcatg gagatcgagc cggagatgct ggccatggag 481 accgccgtcc ccgtgtactt tgccgtggag gacgaggccc tgctgtctat ctacaagcag 541 acccaggctg cctccgcctc ccagggctcc gcctctgctg ctgaagtact gctgcgcacg 601 gccactgcca acggcttcca gatggtcacc agcggggtac agagcaaggc cgtgagtgac 661 tggctgattg ccagcgtgga ggggcggctg acggggctgg gcggagagga ccttcccacc 721 atcgtcatcg tggcccacta cgacgccttt ggagtggccc cctggctgtc gctgggcgcg 781 gactccaacg ggagcggcgt ctctgtgctg ctggagctgg cacgcctctt ctcccggctc 841 tacacctaca agcgcacgca cgccgcctac aacctcctgt tctttgcgtc tggaggaggc 901 aagtttaact accagggaac caagcgctgg ctggaagaca acctggacca cacagactcc 961 agcctgcttc aggacaatgt ggccttcgtg ctgtgcctgg acaccgtggg ccggggcagc 1021 agcctgcacc tgcacgtgtc caagccgcct cgggagggca ccctgcagca cgccttcctg 1081 cgggagctgg agacggtggc cgcgcaccag ttccctgagg tacggttctc catggtgcac 1141 aagcggatca acctggcgga ggacgtgctg gcctgggagc acgagcgctt cgccatccgc 1201 cgactgcccg ccttcacgct gtcccacctg gagagccacc gtgacggcca gcgcagcagc 1261 atcatggacg tgcggtcccg ggtggattct aagaccctga cccgtaacac gaggatcatt 1321 gcagaggccc tgactcgagt catctacaac ctgacagaga aggggacacc cccagacatg 1381 ccggtgttca cagagcagat gatccagcag gagcagctgg actcggtgat ggactggctc 1441 accaaccagc cgcgggccgc gcagctggtg gacaaggaca gcaccttcct cagcacgctg 1501 gagcaccacc tgagccgcta cctgaaggac gtgaagcagc accacgtcaa ggctgacaag 1561 cgggacccag agtttgtctt ctacgaccag ctgaagcaag tgatgaatgc gtacagagtc 1621 aagccggccg tctttgacct gctcctggct gttggcattg ctgcctacct cggcatggcc 1681 tacgtggctg tccagcactt cagcctcctc tacaagaccg tccagaggct gctcgtgaag 1741 gccaagacac agtgacacag ccacccccac agccggagcc cccgccgctc cacagtccct 1801 ggggccgagc acgagtgagt ggacactgcc ccgccgcggg cggccctgca gggacagggg 1861 ccctctccct ccccggcggt ggttggaaca ctgaattaca gagctttttt ctgttgctct 1921 ccgagactgg ggggggattg tttcttcttt tccttgtctt tgaacttcct tggaggagag 1981 cttgggagac gtcccggggc caggctacgg acttgcggac gagcccccca gtcctgggag 2041 ccggccgccc tcggtctggt gtaagcacac atgcacgatt aaagaggaga cgccgggacc 2101 ccctgcccga tcgcgcgcgg cctccgccca ccgcctcctg ccgcaagggg cctggactgc 2161 aggcctgacc tgctccctgc tccgtgtctg tcctaggacg tcccctcccg ctccccgatg 2221 gtggcgtgga catggttatt tatctctgct ccttcttgcc tggaggaggg cagtgccagc 2281 cctggggttc tgggattcca gccctcctgg agccttttgt tccccatgtg gtctcagtga 2341 cccgtccccc tgacagtggg ctcggggagc tgcatcaccc agccttcccc ttctccgact 2401 gcagggtctg atgtcatcgt tgacagcctt tgcttcgtgg gggcctggca gggcccctgc 2461 ctccccgacc cccgacccac tgcaaacccc cgttcccccg cactcctctt ctcccagccc 2521 atccctccgg cccctgtgcc tctgcggccc cagcccagct cccagggccg tcacctgctt 2581 ggccctggcc cagctccctg ccctgagtcc tgagccagtg cctggtgttt cctgggctcg 2641 gtactgggcc cccaggccat ccaggctttg ccacggccag ttggtcctcc ctggggaact 2701 gggtgcgggt ggagtactgg gaggcaggag gtggcccggg gaggccttgt ggctcctccc 2761 ctcgctcctc gccctgggcc tcagcttcct catcaataga aaggatgtgt tcggggtggg 2821 ggcgtcaggt gagaacgttt gctgggaagg agaggacttg gggcatggcc tctggggcca 2881 cccttcctgg aactcggaga ggaaggtccg ggccctcggg aagccttgga cagaaccctc 2941 caccccgcag accaggcgcc gtgtgtgtgt gggagagaag gaggcccgtg ttgagctcag 3001 ggagaccccg gtgtgtccgt tctttagcaa tataacctac ccagcacctc tgccctccag 3061 aacctgcagc ctggaggggt gaggggacaa ccacccctct ttcctccagg ttggcagggg 3121 accctcttct cccgtctgcc ctgcgggttg cccgcctcct ccagagactt gcccaagggc 3181 ccatcaccac tggcctctgg gcacttgtgc tgagactctg ggacccaggc agctgccacc 3241 ttgtcaccat gagagaattt ggggagtgct tgcatgctag ccagcaggct cctgtctggg 3301 tgccacgggg ccagcatttt ggagggagct tccttccttc cttcctggac aggtcgtcag 3361 gatggatgca ctgactgacc gtctggggct caggctggtg tgggatgcag ccggccgatg 3421 agaaaataaa gccatattga atgatcaaaa aaaaaaaaaa aaaa //