LOCUS BC025783 3614 bp mRNA linear HUM 01-SEP-2006
DEFINITION Homo sapiens zinc finger protein 417, mRNA (cDNA clone MGC:34079
IMAGE:5226312), complete cds.
ACCESSION BC025783
VERSION BC025783.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3614)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14249531.
FEATURES Location/Qualifiers
source 1..3614
/db_xref="H-InvDB:HIT000040022"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34079 IMAGE:5226312"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3614
/gene="ZNF417"
/gene_synonym="MGC34079"
/db_xref="GeneID:147687"
/db_xref="HGNC:HGNC:20646"
CDS 166..1893
/gene="ZNF417"
/gene_synonym="MGC34079"
/codon_start=1
/product="zinc finger protein 417"
/protein_id="AAH25783.1"
/db_xref="GeneID:147687"
/db_xref="HGNC:HGNC:20646"
/translation="MAAAAPRRPTQQGTVTFEDVAVNFSQEEWCLLSEAQRCLYRDVM
LENLALISSLGCWCGSKDEEAPCKQRISVQRESQSRTPRAGVSPKKAHPCEMCGLILE
DVFHFADHQETHHKQKLNRSGACGKNLDDTAYLHQHQKQHIGEKFYRKSVREASFVKK
RKLRVSQEPFVFHEFGKDVLPSSGLCQEAAAVEKTDSETMHGPPFQEGKTNYSCGKRT
KAFSTKHSVIPHQKLFTRDGCYVCSDCGKSFSRYVSFSNHQRDHTAKGPYDCGECGKS
YSRKSSLIQHQRVHTGKTAYPCEECGKSFSQKGSLISHQLVHTGERPYECREYGKSFG
QKGNLIQHQQGHTGERAYHCGECGKSFRQKFCFINHQRVHTGERPYKCGECGKSFGQK
GNLVQHQRGHTGERPYECKECGKSFRYRSHLTEHQRLHTGERPYNCRECGKLFNRKYH
LLVHERVHTGERPYACEVCGKLFGNKNCVTIHQRIHTGERPYECSECGKSFLSSSALH
VHKRVHSGQKPYKCSECGKSFAECSSLIKHRRIHTGERPYECTKCGKTFQRSSTLLHH
QSSHRRKAL"
BASE COUNT 1022 a 758 c 885 g 949 t
ORIGIN
1 cggtgacgcg ggtgtttccc cagtttgtgg cccctgagtg ctgggggggg accgcggtga
61 ctgaacctag aaggtggaga ggaatcgtcc tcggtgccca gaggcggctc tgcagccccg
121 tgacggcgac cactgctccc gggccgtgct tccccaagta gtccgatggc agcggctgcg
181 ccgaggcgcc cgactcagca gggcactgtg acctttgaag atgtggctgt gaacttttcc
241 caggaggagt ggtgtcttct tagtgaggct cagaggtgct tgtaccgtga tgtgatgcta
301 gagaacctgg ctctcatatc ctcgctgggt tgttggtgtg gatcaaaaga tgaggaggca
361 ccttgtaagc agagaatttc tgtacaaaga gagtctcaga gcaggactcc tagggcaggt
421 gtttctccta agaaggctca cccctgtgaa atgtgtggcc tcatcttgga ggatgttttt
481 cactttgctg accaccagga aactcatcac aagcagaagc tgaacaggag tggagcatgt
541 ggaaaaaact tggatgacac tgcatacctt catcagcacc agaagcagca tattggagag
601 aaattctaca gaaagagtgt cagagaagca tcgtttgtaa agaaacgtaa gctcagggtg
661 tcacaggagc catttgtctt ccacgagttt gggaaggacg ttctgcccag ttcaggattg
721 tgccaagaag cagctgctgt agagaagaca gacagtgaaa ctatgcatgg cccacccttt
781 caggagggaa aaactaatta cagttgtgga aaacgcacaa aagccttcag caccaaacac
841 tcagttattc cacaccagaa acttttcact agagatggat gttatgtgtg cagtgattgt
901 ggaaaatcct ttagcagata tgtcagcttc agtaatcatc agcgagatca cactgcaaaa
961 ggaccttatg attgtggaga gtgtgggaaa tcttatagtc gaaagagcag ccttattcaa
1021 catcagcgag tccacactgg aaagacagct tatccctgtg aggagtgcgg gaaatctttt
1081 agtcagaagg gcagccttat tagccatcag cttgttcaca ctggagaaag gccttatgag
1141 tgtagagaat atgggaaatc ttttggtcaa aagggtaacc tcattcaaca tcagcaaggt
1201 cacactggag agagagctta tcactgtggg gaatgtggga aatcttttcg tcagaagttc
1261 tgctttatta accatcagcg tgttcacact ggagaaaggc cttacaagtg tggagaatgt
1321 ggaaaatctt ttggtcaaaa gggcaacctc gttcaacatc agcgaggtca tactggagaa
1381 aggccctatg agtgcaagga atgtgggaaa tcatttaggt acagatccca cctcactgaa
1441 caccagagac ttcacactgg ggaaagacct tacaattgta gggaatgtgg gaaattattt
1501 aacaggaagt atcatcttct cgttcatgag agagttcaca ctggagaaag gccatatgcg
1561 tgtgaggtat gtgggaaatt atttggtaat aagaactgcg tgactataca tcagaggatt
1621 cacactggag aaaggccgta tgagtgcagt gaatgtggta aatcatttct ttccagctct
1681 gcgcttcatg ttcataaaag agttcattct ggacaaaagc cttataagtg cagtgaatgt
1741 ggaaaatcct ttgctgaatg ttccagtctc attaaacaca ggagaattca cactggagaa
1801 aggccttatg aatgtaccaa atgtggaaaa acatttcagc gaagctctac cctccttcat
1861 catcagagtt cacacaggag aaaggcctta tgagtgcagt gaatatggga aatcgtttgc
1921 tgaaacatcc cgtctcgtta aacacaggag agttcatact ggagaaagga cttatgagtg
1981 ctgtcaatct gggaaacatc agaatgtctg ctctccttgg tcttaagaga cttcgcattg
2041 gaacggagtc tcattctgtc acccaggctg gagtgcagtg gtgcaatctt ggctcactgc
2101 aacttgggcc tcccaggttc aagtgattct cctacctcag cctcccaagg agctgagatt
2161 acgagtacac cacaccatgc ccggccaaat acttggtttt cagtaccaca agagctatga
2221 gctggttatc cacttcatgt ggaatcataa gtgtccccaa gtgacaatac gtatagattg
2281 ctgggcagtg aaacagttaa gatgtcaccg tagcttgctt tctattcaac atctttctaa
2341 gattacctta ctatttcttt tgttccaagt ttgtatttcc tcagagttct cacatatgga
2401 aaggatacac actttgtaga aacaagaact ttatgttatc caagttctgg gatagccatg
2461 agctccaatt acctcagagc tccgagtcct ctactcagta cccgttgaga tttatgtgtt
2521 ctgaggcttt tgtcttctag ctacttactt cattctccat gggtaacgtc attcatccac
2581 attaactaat ttcctcactc caagctcttt tctggagata atctccagtc tctgtgcaga
2641 cactgtcatt gcactttctg ctgaaatggt agtttcttgc cagcaaggtg agattatgga
2701 atccagaatc ttttttcagg ggccacatgc ccatttcccc acttgcatga atgtcgacac
2761 tgtagccaca gttttggccg taaatgtgaa tttggcaagt aaccactgtt cccaaattgg
2821 gaaatgtccc agtcagaaga agattatctg ggacactgat actgacaggg agatgggaca
2881 ttctgaggga cccggaggca gggagccacc tcctcagctt ccctgagggc tgcctagaat
2941 ctctcttgtt tcctctcact ctgaattatt cttcctctca tgactgacca aatacatgga
3001 acctcacaaa gtccatttta agagctttat cttgtgaagt gaagaacatg aagatagttt
3061 gaatcaaagt tattgagtgg acacttaatg tctttataac attttttaca tatgtgtttg
3121 tgttttttgg ggagcataat ttgcaaatgg aatatctgtt attttactaa gatgcttcat
3181 ggatacaaga gttaaaactt cctgtcccat ttagtgaaac aaaaggttaa gaaatgtgga
3241 taaagcttgt aagttagaaa tggcaagata atcagctata tgaagaatct cagctgggtg
3301 ttttggctca ggcctgtgat cccagcactt tgggaggctg aggtgggtgg cttacagggt
3361 caggagttcg agaccaccct ggacaatatg gtgaaaccct gtctttacta aaaatacaaa
3421 aattacccaa gcatagtggt gggtgcctgt ggtcccagct gcttgggagg ctgaggcagg
3481 agaattcgtt gggcctggga ggcataggtt gcagtgagcc gagattgcac cactgcactc
3541 cagcctggtg acagggcgag actccgtctc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
3601 aaaaaaaaaa aaaa
//