LOCUS BC025764 2129 bp mRNA linear HUM 19-OCT-2006
DEFINITION Homo sapiens carbohydrate (N-acetylgalactosamine 4-0)
sulfotransferase 9, mRNA (cDNA clone MGC:34120 IMAGE:5205829),
complete cds.
ACCESSION BC025764
VERSION BC025764.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2129)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2129)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: h Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13899234.
FEATURES Location/Qualifiers
source 1..2129
/db_xref="H-InvDB:HIT000040011"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34120 IMAGE:5205829"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2129
/gene="CHST9"
/gene_synonym="GALNAC4ST-2"
/db_xref="GeneID:83539"
/db_xref="HGNC:HGNC:19898"
/db_xref="MIM:610191"
CDS 259..1575
/gene="CHST9"
/gene_synonym="GALNAC4ST-2"
/codon_start=1
/product="CHST9 protein"
/protein_id="AAH25764.2"
/db_xref="GeneID:83539"
/db_xref="HGNC:HGNC:19898"
/db_xref="MIM:610191"
/translation="MVMNPKQVFLSVLIFGVAGLLLFMYLQVWIEEQHTGRVEKRREQ
KVTSGWGPVKYLRPVPRIMSTEKIQEHITNQNPKFHMPEDVREKKENLLLNSERSTRL
LTKTSHSQGGDQALSKSTGSPTEKLIEKRQGAKTVFNKFSNMNWPVDIHPLNKSLVKD
NKWKKTEETQEKRRSFLQEFCKKYGGVSHHQSHLFHTVSRIYVEDKHKILYCEVPKAG
CSNWKRILMVLNGLASSAYNISHNAVHYGKHLKKLDSFDLKGIYTRLNTYTKAVFVRD
PMERLVSAFRDKFEHPNSYYHPVFGKAIIKKYRPNACEEALINGSGVKFKEFIHYLLD
SHRPVGMDIHWEKVSKLCYPCLINYDFVGKFETLEEDANYFLQMIGAPKELKFPNFKD
RHSSDERTNAQVVRQYLKDLTRTERQLIYDFYYLDYLMFNYTTPFL"
BASE COUNT 740 a 397 c 429 g 563 t
ORIGIN
1 ccccgctccc ggcgcggcgc tccgctctca gccacctcac ggctgccagg agtgcgcggg
61 agtttgcccc ggagcgcggg gaagtttcct ccgaagctgc gctcctggaa cagcagcacc
121 tgcaagcgcc cggcagcggc ccgcgaggtt actttatgga attgggctct tagagaacaa
181 gaaaagactg aagttttacg ggaaaacaaa tcatgtggtc ttcagattct gaaataagga
241 gaaatgcagc catctgaaat ggtcatgaac cccaaacaag tcttcctctc tgtgctgata
301 tttggagtag ctgggctact cctcttcatg tatttgcaag tctggattga agaacaacat
361 acagggagag tggagaagag aagagaacaa aaagtaactt caggatgggg accagtgaag
421 tacttgcggc ctgtacccag aatcatgagt acagaaaaaa tccaggaaca tatcaccaac
481 cagaacccca agtttcacat gcctgaggat gtacgagaaa aaaaggaaaa tcttctactc
541 aattctgaga gatctactag gctcttaaca aagaccagtc attcacaagg aggggatcaa
601 gctttaagta agtccacagg gtcaccaaca gagaagttga ttgaaaaacg tcaaggagct
661 aagactgttt ttaacaagtt cagcaacatg aattggccag tggacattca ccctttaaac
721 aaaagtttag tcaaagataa taaatggaag aaaactgagg agacccaaga gaaacgaagg
781 tctttccttc aggagttttg caagaaatac ggtggggtga gtcatcatca gtcacatctt
841 tttcatacag tatccagaat ctatgtagaa gataaacaca aaatcttata ttgtgaggta
901 cctaaggctg gctgttccaa ttggaaaaga attctgatgg tactaaatgg attggcttcc
961 tctgcataca acatctccca caatgctgtc cactacggga agcatttgaa gaagctagat
1021 agctttgacc taaaagggat atatacccgc ttaaatactt acaccaaagc tgtgtttgtt
1081 cgtgatccca tggaaagatt agtatcagcc tttagggaca aatttgaaca ccccaatagt
1141 tattaccatc cagtattcgg aaaggcaatt atcaagaaat atcgaccaaa tgcctgtgaa
1201 gaagcattaa ttaatggatc tggagtcaag ttcaaagagt ttatccacta cttgctggat
1261 tcccaccgtc cagtaggaat ggacattcac tgggaaaagg tcagcaaact ctgctatccg
1321 tgtttgatca actatgattt tgtagggaaa tttgagactt tggaagaaga tgccaattac
1381 tttttacaga tgatcggtgc tccaaaggag ctgaaatttc ccaactttaa ggataggcac
1441 tcttccgatg aaagaaccaa tgctcaagtc gtgagacagt atttaaagga tctgactaga
1501 actgagagac aattaatcta tgacttttat tacttggact atttaatgtt taattataca
1561 actccatttt tgtagtttgc attcattttc taaaaccctg tatatactta atgatgataa
1621 gttcaaatca gctgtaattt ttctataatt ctctgtatga cagaaattta accaagtgca
1681 gttgtcttga tttaatgtag atttttacca aatagtatga caccaattgg cacaaagtta
1741 taggaaaatc acctacagga gatgtaaaca acttgagttg ctctaaaatg tttggaaaag
1801 agctgctttt gcattatgaa ttatattgtt gaagcaataa cctagccagc tgttgcatta
1861 gctaaagcag cctcttgcaa tggtaggaaa aaaggatctc aaatagcatg agtgtatgtc
1921 tatatcctga aatttattgt ctaaaatgca tgaatatatt tttagcagtc tgtggcatat
1981 taatcaaact gttgaattgt tttcttacac cctggaaatc tttctatcaa ctataatgat
2041 aaatccattt tgaagtgaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//