LOCUS BC025756 3648 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome 11 open reading frame 45, mRNA (cDNA clone
MGC:35558 IMAGE:5201867), complete cds.
ACCESSION BC025756
VERSION BC025756.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3648)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3648)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: d Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450728.
FEATURES Location/Qualifiers
source 1..3648
/db_xref="H-InvDB:HIT000040008"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:35558 IMAGE:5201867"
/tissue_type="Lung, Spleen, fetal, pooled"
/clone_lib="NIH_MGC_122"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..3648
/gene="C11orf45"
/gene_synonym="FLJ43646"
/gene_synonym="MGC35558"
/db_xref="GeneID:219833"
/db_xref="HGNC:HGNC:28584"
CDS 195..632
/gene="C11orf45"
/gene_synonym="FLJ43646"
/gene_synonym="MGC35558"
/codon_start=1
/product="chromosome 11 open reading frame 45"
/protein_id="AAH25756.1"
/db_xref="GeneID:219833"
/db_xref="HGNC:HGNC:28584"
/translation="MLTRLVLSAHLSSTTSPPWTHAAISWELDNVLMPSPRIWPQVTP
TGRSASVRSEGNTSSLWNFSAGQDVHAIVTRTCESVLSSAVYTHGCGCVRSATNITCQ
SSGQQRQAARQEEENSICKAHDSREGRLGYPLSAHQPGSGGPN"
BASE COUNT 874 a 917 c 930 g 927 t
ORIGIN
1 cccacgccta aggtccaggt cccagggctt tcccttgcac cttcatccct ggccctgcag
61 aggcctgctt ctcgcttccg gggtcgccag agcgcccctc ccgccacccc gccatctctt
121 ggccggatcg tgcgagagaa ggggaggagg tctggggttt ccagagtccg cggttttgct
181 aagaagccgc agtgatgttg acgcggctgg tcctcagtgc acacctgagt agcacgacct
241 ctccgccctg gacgcacgct gccatcagct gggagctgga caacgtgctg atgcctagtc
301 ccagaatctg gccccaggtg actccaacag gcaggtctgc ctctgtcagg agtgagggta
361 acacctcctc actctggaat ttctcagctg ggcaggatgt gcatgccata gtaaccagaa
421 cctgtgagtc tgtgctgagc tctgccgtct acacccacgg ctgtggctgt gtgaggtctg
481 ccacaaacat tacctgtcag tcctcaggac aacaaaggca ggcggcccgg caggaagagg
541 agaactcaat ctgcaaggcc catgatagta gagagggccg cctgggctac cccctcagtg
601 cccatcagcc tggttccggt ggtcctaact agccctgtct ccttgccaat agccctgtgc
661 tccccagccc cctcccccat gcagacggct gctatgacat ccctgttcct taaagtgcgg
721 ggttcctcgc tgccttctcc tccctaactg gcaccctgtg caaacctgct gcagagaaca
781 gtgtcttggg cagtgcgata gtcctccagt tcaccaacag taaaaatggt ctcaatgggg
841 agagatgtct gactgcaagc gctgagtcct tccagaggag ggctggaggg acaggagggc
901 ggatcaggtg gcctcctgag ctggttcctg gcgccgatgt aatggatgct gattaccagc
961 ggtgagggca tcgtggaagg gactgcagag gtgtgcgaga tgagtggaat gaggccccag
1021 gtgctgattt ttatgcccag gatgctcctg gctgtcatgg gctcccaggg gctccaggca
1081 tgcacagctc ttccgcctct tctcgaagca gaatgcccca gaaagggcac ctttactatc
1141 cagggtggct agagtcgccg gtggctgtgc gtgggggctg agggctagaa tcagggcaag
1201 gggctttcag tgaaacgcag agccaggcag ggacagcgcg gatctcagaa cagtctttgt
1261 cagatgggac acttcatccc cgcggagctg tccgtgcaca cagcgttctc tgattgccaa
1321 gctgttaagc actctgcgga agggagctgc tgggaaggcg gacgaggcat ctcaggtggg
1381 tgaggggctc cgctgcatca gcgttgctca gacccaccat ccctggggag ctgtcactga
1441 cgcccaggtt tccccttctc agtacatcct gtgcctcctt tctgggctgc ctcagtccct
1501 caaaggggag ctccccacat gggtgggatt attgttgaga acagtcaggg tgttgacgag
1561 gatgcaggac tgaggttgct cccagagtca ctcagtgtcc ctcgttttgc tcggagacat
1621 cctgacctgg gcaagctctt tagggagcat ctttcctgtc tgtgccgcat tctccatggc
1681 ctttgcactc tttttgcttt tgttttaaac acgtcatcaa ttcattgcct gcagcagctt
1741 gtactgcctt ttggtttttc tttgcagaac agctctggaa gtgaagtgtg tgtgtgtgtg
1801 tttgcgtgca ctactctgga ctgggtgcct tacacgtgtt aacacacttg atcagctcag
1861 caacactgtg gaataagtgt aatgtgtcca ttattcagat caggagactg agattcagag
1921 cagggaggga acttgccaga gaccacatgg cttgcaagca gcagaacctg ggtttgaact
1981 gacagcggcc tgacttcaga acccacgctt tcccaccctc ctacttcaca cccatttgag
2041 tccagccatc ttggttctga atcataaccc tgactctcct ggccacatcc tatgctccac
2101 attacatgtt actctacagg ttaccaccct gggtctcttt cctatataag aaatagaaat
2161 atttgtggaa atcctaatgt tcatgacatc tctgccattt tatcaggaaa aattctatcc
2221 taccaaatac tggtataatg tacttggccc ccctggattg gattggtata ggttaagagc
2281 agatataagg tctgaaataa tcccggtatt cctagtatgt ggaattatta tcatggaatc
2341 ataatggcag tttgcacctc tgttgggctc tttcaactcc tgtgttggct caggagaatc
2401 ctatcacatt agtccccttt tgtagttgga tagttgggct tgccagaagg cacacaaatt
2461 tgggttaact catttccagg attctggcat tgtagacaca gaaacaccga ctgtgaagtt
2521 ttatgtaata caaacactgg gagatttagc aataggcctg ccaggcggcc ctggcttctg
2581 gctgcacaac aaaggggggt ggctggtgcc aaatggggca acagaaggtg agtttggggc
2641 ctgcagagcc tcgggtagcc cagaggagcg agagagtatt ggctgttcat tttaactcca
2701 tccttggagg attccccacc acaagcctaa ggaagtaata aaacctcatg cattattttt
2761 tgatatctgg agagaaacac gtaccctaga aatgctgtgg actaattcca tggttacttt
2821 gtcattaaag aaaccaaaat actgagaggt caccataaac acaaaaaggc agagagagaa
2881 ggattaaatg gtgtttcatg taaggatctt taaagggaga cagaattcta gtctgaaagg
2941 agcgcaggca gatctggcat tttgcttggg gagttcaatt ctttggagaa aatacagaga
3001 caaaaagacc attttgatgg tatttaaaat atccctctgc ccagtgtatc taagtgagtc
3061 taaatatatt cagcaatttt ttaaagggca gatattaggc ccgattcaag gtatggaata
3121 tagattcgaa agggttagtg ataggtgagt gcctttcagg tagctttgca tcacagacca
3181 agcccattat tgaggactgt acgtatggag caggcccgtg agcttgtgac tgagtttccc
3241 aacctgccag gctcccattt gcttaggatg aatatttttc tgccctccct ggtgagccac
3301 tgtgggccac tcgccactcc ttacacccct tccctttaat acctcgcttg gcttacttgc
3361 aaaatccaca tgcatcctcc tggatctcac agaagatgta tgaaaagtca tggccatgaa
3421 aagggcacgg aaatcaaatt aattaatttt gctttttccc cacgtttgtt tctgtctgtc
3481 tggtactttt cctttttaag cctgccatct ctttgaaagt gagccgcaca gtgataatcc
3541 attttcttca ttgtaacccc acagtgtatg tattccacat taaataataa aagggattaa
3601 taattaaatc aaaatgaaaa accaaaaaaa aaaaaaaaaa aaaaaaaa
//