LOCUS BC025682 1556 bp mRNA linear HUM 04-AUG-2008 DEFINITION Homo sapiens gasdermin B, mRNA (cDNA clone MGC:34771 IMAGE:5205060), complete cds. ACCESSION BC025682 VERSION BC025682.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1556) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1556) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: g Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, GenomeScan gene prediction. FEATURES Location/Qualifiers source 1..1556 /db_xref="H-InvDB:HIT000039955" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34771 IMAGE:5205060" /tissue_type="Lung, Spleen, fetal, pooled" /clone_lib="NIH_MGC_122" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1556 /gene="GSDMB" /gene_synonym="GSDML" /gene_synonym="PP4052" /gene_synonym="PRO2521" /db_xref="GeneID:55876" /db_xref="HGNC:HGNC:23690" /db_xref="MIM:611221" CDS 24..1259 /gene="GSDMB" /gene_synonym="GSDML" /gene_synonym="PP4052" /gene_synonym="PRO2521" /codon_start=1 /product="GSDMB protein" /protein_id="AAH25682.1" /db_xref="GeneID:55876" /db_xref="HGNC:HGNC:23690" /db_xref="MIM:611221" /translation="MFSVFEEITRIVVKEMDAGGDMIAVRSLVDADRFRCFHLVGEKR TFFGCRHYTTGLTLMDILDTDGDKWLDELDSGLQGQKAEFQILDNVDSTGELIVRLPK EITISGSFQGFHHQKIKISENRISQQYLATLENRKLKRELPFSFRSINTRENLYLVTE TLETVKEETLKSDRQYKFWSQISQGHLSYKHKGQREVTIPPNRVLSYRVKQLVFPNKE TMSAGLDIHFRGKTKSFPEGKSLGSEDSRNMKEKLEDMESVLKDLTEEKRKDVLNSLA KCLGKEDIRQDLEQRVSEVLISRELHMEDSDKPLLSSLFNAAGVLVEARAKAILDFLD ALLELSEEQQFVAEALEKGTLPLLKDQVKSVMEQNWDELASSPPDMDYDPEARILCAL YVVVSILLELAEGPTSVSS" BASE COUNT 484 a 336 c 381 g 355 t ORIGIN 1 gtttctgagt tggtccaggc gcaatgttca gcgtatttga ggaaatcaca agaattgtag 61 ttaaggagat ggatgctgga ggggatatga ttgccgttag aagccttgtt gatgctgata 121 gattccgctg cttccatctg gtgggggaga agagaacttt ctttggatgc cggcactaca 181 caacaggcct caccctgatg gacattctgg acacagatgg ggacaagtgg ttagatgaac 241 tggattctgg gctccaaggt caaaaggctg agtttcaaat tctggataat gtagactcaa 301 cgggagagtt gatagtgaga ttacccaaag aaataacaat ttcaggcagt ttccagggct 361 tccaccatca gaaaatcaag atatcggaga accggatatc ccagcagtat ctggctaccc 421 ttgaaaacag gaagctgaag agggaactac ccttttcatt ccgatcaatt aatacgagag 481 aaaacctgta tctggtgaca gaaactctgg agacggtaaa ggaggaaacc ctgaaaagcg 541 accggcaata taaattttgg agccagatct ctcagggcca tctcagctat aaacacaagg 601 gccaaaggga agtgaccatc cccccaaatc gggtcctgag ctatcgagta aagcagcttg 661 tcttccccaa caaggagacg atgagtgctg gtttggatat tcatttcagg ggcaaaacaa 721 aatcctttcc agaaggaaag tctttgggtt cggaggattc cagaaacatg aaggagaagt 781 tggaggacat ggagagtgtc ctcaaggacc tgacagagga gaagagaaaa gatgtgctaa 841 actccctcgc taagtgcctc ggcaaggagg atattcggca ggatctagag caaagagtat 901 ctgaggtcct gatttccagg gagctacaca tggaggactc agacaagcct ctcctaagca 961 gcctttttaa tgctgctggg gtcttggtag aagcgcgtgc aaaagccatt ctggacttcc 1021 tggatgccct cctagagctg tctgaagagc agcagtttgt ggctgaggcc ctggagaagg 1081 ggacccttcc tctgttgaag gaccaggtga aatctgtcat ggagcagaac tgggatgagc 1141 tggccagcag tcctcctgac atggactatg accctgaggc acgaattctc tgtgcgctgt 1201 atgttgttgt ctctatcctg ctggagctgg ctgaggggcc tacctctgtc tcttcctaac 1261 tacaaaagcc ctttctcccc acaagcctct gggttttccc tttaccagtc tgtcctcact 1321 gccatcgcca ctaccatcct gtcaccagtg ggacctcttt aaaacaagca gccaaccatt 1381 ctttgatgta tcccattcgc tccatgttaa catccaaaac cagcctggat ttcatacatg 1441 gacttctgat taaaagtggc aggttgtgca tgttaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa //