LOCUS BC025667 1617 bp mRNA linear HTC 24-SEP-2007
DEFINITION Homo sapiens family with sequence similarity 123C, mRNA (cDNA clone
IMAGE:5200887), with apparent retained intron.
ACCESSION BC025667
VERSION BC025667.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1617)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1617)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: c Column: 13
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1617
/db_xref="H-InvDB:HIT000091091"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5200887"
/tissue_type="Brain, adult, 6 pooled whole brains"
/clone_lib="NIH_MGC_114"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
BASE COUNT 449 a 452 c 391 g 325 t
ORIGIN
1 gggactacag gcgtgcgcca ccttgcccgg ctaatttttc tatttttttg tagagacggg
61 ttttcgccat gttgcctcag ctaaaatgtc tcaaaatctc ctcaactaaa atgtctcaaa
121 atctcagcct cccacagtgc tggatgacag gagtgagcca gccagcatca tgcatccctg
181 tgcgccctgc cagggctggc gggaccctcc cacccttgtt gatgggcagt gctagattat
241 ttgtcacgaa tcatccccta caaacaatga tttccctccg cttgcactct ctaactagag
301 ccatggatgg ccaaatgctt tttgggaaga agccaatgga ttctcctcgg ctctgcctgc
361 aagtaacaaa ggcttttgac tccactccct ccacgctgtc agatcgccat tccccttcag
421 gaaaacttcg aatggggctg tggacctcac tccccaaaat gtcacaacac atgtgcagca
481 ccccgacatt cagaaccatg aagggagaag gtggctggtg tctgtaggag ggacaggtgt
541 ccgtcctggg ccagtgtcag gccagcaggt gcagggacag atgggccatc cacattctcc
601 aagattagct tctacctcaa ccagcacacc tcagcaagat gccaggattg ggctccacag
661 gcagccatga aatgggtttc tggaggaaag atcagcacag gaaaaggggt cagtcaggtc
721 gcaggcaaag tgctagggaa atcccatctc atgcagagct cccaccaaga ggagcgtgag
781 ttgtgctgtc ctggctcgag aagaaggcag cacaggatct gtagctgagg gtggccctcc
841 caccagggga cgctggtcag tgcctctcct gactgcctga cgcttggtct ccggtggccc
901 tctctcacca gggctccctg aggcctgctg caagcaggac acaggctgca catcacaggt
961 tccaaagtgt gcagcaaggc ttctgaccag gcccgtccag atctggagcc cctgtggagc
1021 cacatctgag ccctcctccc aagactcaca cacaggacca cagcagcatc actgagccga
1081 gctgggggca agtttcacca gattcgctta cctgatcctt gcatcaacct caatgcagtt
1141 gtcagcccca tttttcagac ctggacacgg aggcacaggg tgctggtgtg acttgcccac
1201 agttattagt gtgtgaggtg atgggttttg tcccgtccca gctccaaagg ccctgctctt
1261 cctcaagctc cagaacctct cactgagctc ctgcagtgaa gtcccccctc agagccctca
1321 gcccttcctg ctttcaggct ccagatgtca gagcaccctt gggtgccagc cacaagtggc
1381 cctccagcag gctgagcacc cagggggagg ctgccctgac tcaaccccag cctggggctt
1441 tgtgctgcac ctgagggagt agccgctctg taaatccttg ttgaaagaat gaagtgtcaa
1501 aaggtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//