LOCUS BC025665 2805 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens polycystic kidney disease 2-like 1, mRNA (cDNA clone MGC:34317 IMAGE:5200440), complete cds. ACCESSION BC025665 VERSION BC025665.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2805) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2805) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Life Technologies, Inc. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 49 Row: c Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 33598943. FEATURES Location/Qualifiers source 1..2805 /db_xref="H-InvDB:HIT000039945" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:34317 IMAGE:5200440" /tissue_type="Brain, adult, 6 pooled whole brains" /clone_lib="NIH_MGC_114" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2805 /gene="PKD2L1" /gene_synonym="PCL" /db_xref="GeneID:9033" /db_xref="HGNC:HGNC:9011" /db_xref="MIM:604532" CDS 81..2498 /gene="PKD2L1" /gene_synonym="PCL" /codon_start=1 /product="polycystic kidney disease 2-like 1" /protein_id="AAH25665.1" /db_xref="GeneID:9033" /db_xref="HGNC:HGNC:9011" /db_xref="MIM:604532" /translation="MNAVGSPEGQELQKLGSGAWDNPAYSGPPSPHGTLRVCTISSTG PLQPQPKKPEDEPQETAYRTQVSSCCLHICQGIRGLWGTTLTENTAENRELYIKTTLR ELLVYIVFLVDICLLTYGMTSSSAYYYTKVMSELFLHTPSDTGVSFQAISSMADFWDF AQGPLLDSLYWTKWYNNQSLGHGSHSFIYYENMLLGVPRLRQLKVRNDSCVVHEDFRE DILSCYDVYSPDKEEQLPFGPFNGTAWTYHSQDELGGFSHWGRLTSYSGGGYYLDLPG SRQGSAEALRALQEGLWLDRGTRVVFIDFSVYNANINLFCVLRLVVEFPATGGAIPSW QIRTVKLIRYVSNWDFFIVGCEVIFCVFIFYYVVEEILELHIHRLRYLSSIWNILDLV VILLSIVAVGFHIFRTLEVNRLMGKLLQQPNTYADFEFLAFWQTQYNNMNAVNLFFAW IKIFKYISFNKTMTQLSSTLARCAKDILGFAVMFFIVFFAYAQLGYLLFGTQVENFST FIKCIFTQFRIILGDFDYNAIDNANRILGPAYFVTYVFFVFFVLLNMFLAIINDTYSE VKEELAGQKDELQLSDLLKQGYNKTLLRLRLRKERVSDVQKVLQGGEQEIQFEDFTNT LRELGHAEHEITELTATFTKFDRDGNRILDEKEQEKMRQDLEEERVALNTEIEKLGRS IVSSPQGKSGPEAARAGGWVSGEEFYMLTRRVLQLETVLEGVVSQIDAVGSKLKMLER KGWLAPSPGVKEQAIWKHPQPAPAVTPDPWGVQGGQESEVPYKREEEALEERRLSRGE IPTLQRS" BASE COUNT 723 a 719 c 742 g 621 t ORIGIN 1 ggctgggctg tgcctctgct ccctcttcct ctagctgaga gtgggcacct ggggtaccgg 61 gcccccccac ctcattcccc atgaatgctg tgggaagtcc tgaggggcag gagctgcaaa 121 agctggggag tggagcctgg gacaaccccg cctacagtgg tcccccttcc ccacacggga 181 cgctgagagt ctgcaccatc tccagcacgg ggcctctcca gccccaaccc aagaagcctg 241 aagatgaacc ccaggagacg gcatacagga cccaggtgtc cagctgctgc ctccatatct 301 gtcaaggcat cagaggactt tggggaacaa ccctgactga gaacacagct gagaaccggg 361 aactttatat caagaccacc ctgagggagc tgttggtata tattgtgttc ctggtggaca 421 tctgtctact gacctatgga atgacaagct ccagtgctta ttactacacc aaagtgatgt 481 ctgagctctt cttacatact ccatcagaca ctggagtctc ctttcaggcc atcagcagca 541 tggcggactt ctgggatttt gcccagggcc cactactgga cagtttgtat tggaccaaat 601 ggtacaacaa ccagagcctg ggccatggct cccactcctt catctactat gagaacatgc 661 tgctgggggt tccgaggctg cggcagctaa aggtccgcaa tgactcctgt gtggtgcatg 721 aagacttccg ggaggacatt ctgagctgct atgatgtcta ctctccagac aaagaagaac 781 aactcccctt tgggcccttc aatggcacag cgtggacata ccactcgcag gatgagttgg 841 ggggcttctc ccactggggc aggctcacaa gctacagcgg aggtggctac tacctggacc 901 ttccaggatc ccgacagggt agtgcagagg ctctccgggc ccttcaggag gggctgtggc 961 tggacagggg cactcgagtg gtgttcatcg acttctcagt ctacaatgcc aatatcaatc 1021 ttttctgtgt cctgaggctg gtggtggagt ttccagctac aggaggtgcc atcccatcct 1081 ggcaaatccg cacagtcaag ctgatccgct atgtcagcaa ctgggacttc tttatcgttg 1141 gctgtgaggt catcttctgc gtcttcatct tctactatgt ggtggaagag atcctggagc 1201 tccacattca ccggcttcgc tacctcagca gcatctggaa catactggac ctggtggtca 1261 tcttgctctc cattgtggct gtgggcttcc acatattccg aaccctcgag gtgaatcggc 1321 tcatggggaa gctcctgcag cagccaaaca cgtatgcaga ctttgagttc ctcgccttct 1381 ggcagacaca gtacaacaac atgaatgctg tcaacctctt cttcgcctgg atcaagatat 1441 tcaagtacat cagcttcaac aaaaccatga cccagctctc ctccacgctg gcccgctgtg 1501 ccaaggacat cctgggcttc gccgtcatgt tcttcattgt tttcttcgcc tatgcccaac 1561 tcggctacct gcttttcggg acccaagtgg aaaactttag cactttcatc aagtgcattt 1621 tcactcagtt ccggataatc ctcggggact ttgactacaa tgctatcgac aatgccaacc 1681 gcatcctggg ccctgcctac tttgtcacct atgtcttctt cgtcttcttc gtgctcctga 1741 acatgttcct ggccatcatc aatgacacat attcagaggt caaggaggag ctggctggac 1801 agaaggatga gctgcaactt tctgacctcc tgaaacaggg ctacaacaag accctactaa 1861 gactgcgtct gaggaaggag agggtttcgg atgtgcagaa ggtcctgcag ggtggggagc 1921 aggagatcca gtttgaggat ttcaccaaca ccttaaggga actgggacac gcagagcatg 1981 aaatcactga gctcacggcc accttcacca agtttgacag agatgggaat cgtattctgg 2041 atgagaagga acaggaaaaa atgcgacagg acctggagga agagagggtg gccctcaaca 2101 ctgagattga gaaactaggc cgatctattg tgagcagccc acaaggcaaa tcgggtccag 2161 aggctgccag agcaggaggc tgggtttcag gagaagaatt ctacatgctc acaaggagag 2221 ttctgcagct ggagactgtc ctggaaggag tagtgtccca gattgatgct gtaggctcaa 2281 agctgaaaat gctggagagg aaggggtggc tggctccctc cccaggcgtg aaggaacaag 2341 ctatttggaa gcacccgcag ccagccccag ctgtgacccc agacccctgg ggagtccagg 2401 gtgggcagga gagtgaggtt ccctataaaa gagaagagga agccttagag gagaggagac 2461 tctcccgtgg tgagattcca acgttgcaga ggagttaagt gtgaggcact cccggagcaa 2521 agtctatgaa ggatcttctg caagaggctg cctcctggtc cactgaacct ggaaactgag 2581 tgggctttaa ccaggagata aaaatggagc ctgaagggaa tcaggcaagg aaatgaactc 2641 aggattcaga gatctttgaa ttaatatgtg gtgggttctg acattattct tccataagac 2701 catgtgggtt tccatggtgg ctatcaataa aactccttag gaaaaaaaaa aaaaaaaaaa 2761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //