LOCUS BC025405 2096 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens tubulin, epsilon 1, mRNA (cDNA clone MGC:33406
IMAGE:4824105), complete cds.
ACCESSION BC025405
VERSION BC025405.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2096)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2096)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 16, 2003 this sequence version replaced BC025405.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: l Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 37059741.
FEATURES Location/Qualifiers
source 1..2096
/db_xref="H-InvDB:HIT000039933"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33406 IMAGE:4824105"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2096
/gene="TUBE1"
/gene_synonym="dJ142L7.2"
/gene_synonym="FLJ22589"
/gene_synonym="TUBE"
/db_xref="GeneID:51175"
/db_xref="HGNC:HGNC:20775"
/db_xref="MIM:607345"
CDS 20..1447
/gene="TUBE1"
/gene_synonym="dJ142L7.2"
/gene_synonym="FLJ22589"
/gene_synonym="TUBE"
/codon_start=1
/product="tubulin, epsilon 1"
/protein_id="AAH25405.1"
/db_xref="GeneID:51175"
/db_xref="HGNC:HGNC:20775"
/db_xref="MIM:607345"
/translation="MTQSVVVQVGQCGNQIGCCFWDLALREHAAVNQKGIYDEAISSF
FRNVDTRVVGDGGSISKGKICSLKARAVLIDMEEGVVNEILQGPLRDVFDTKQLITDI
SGSGNNWAVGHKVFGSLYQDQILEKFRKSAEHCDCLQCFFIIHSMGGGTGSGLGTFLL
KVLEDEFPEVYRFVTSIYPSGEDDVITSPYNSILAMKELNEHADCVLPIDNQSLFDII
SKIDLMVNSGKLGTTVKPKSLVTSSSGALKKQHKKPFDAMNNIVANLLLNLTSSARFE
GSLNMDLNEISMNLVPFPQLHYLVSSLTPLYTLTDVNIPPRRLDQMFSDAFSKDHQLL
RADPKHSLYLACALMVRGNVQISDLRRNIERLKPSLQFVSWNQEGWKTSLCSVPPVGH
SHSLLALANNTCVKPTFMELKERFMRLYKKKAHLHHYLQVEGMEESCFTEAVSSLSAL
IQEYDQLDATKNMPVQDLPRLSIAM"
BASE COUNT 648 a 387 c 404 g 657 t
ORIGIN
1 gagccggcgg cgcaccacca tgacccagtc ggtggtcgta caggtcggcc agtgcggaaa
61 ccagatcggc tgctgcttct gggacctggc actaagggag cacgccgcgg tcaaccagaa
121 aggaatttat gatgaggcaa taagcagctt ctttagaaat gtggacacca gagtggttgg
181 tgatggtgga agtatttcca agggaaaaat atgttcttta aaagcacgag cagtcttgat
241 tgatatggaa gaaggggtag tgaatgaaat tctgcaggga ccactgagag atgtatttga
301 tacgaaacag ctcatcactg atatttctgg ctcaggaaat aattgggccg tgggtcacaa
361 agttttcggc agtctttacc aagaccagat tttagagaaa ttcagaaagt cggcagagca
421 ctgtgattgc ttgcagtgtt tctttataat acattccatg ggaggaggaa caggatctgg
481 acttggcaca tttcttttaa aggtgcttga agacgaattc ccagaagtat acagatttgt
541 gacttccatt tatccttctg gtgaggatga tgtcataacc tcaccttata atagcatctt
601 ggcaatgaag gaacttaatg agcatgcaga ctgtgtattg cccattgaca atcaatcttt
661 atttgacatc attagcaaaa tcgacctcat ggtgaattct ggaaagttgg gtacaactgt
721 gaagccaaag agtctggtta cttcaagttc tggggcttta aaaaagcagc ataagaagcc
781 ctttgatgca atgaataaca ttgtggcaaa tttgctcctc aacctaacga gctctgcaag
841 atttgaaggg tcccttaata tggaccttaa tgaaatcagc atgaatttag ttccttttcc
901 tcaacttcat tatctcgtgt caagcctaac acctctgtat acactgacag atgttaacat
961 tcctcctaga agattggatc agatgttttc agatgccttt agtaaagatc accagctgct
1021 tcgggcagac cccaaacaca gtctttacct cgcctgtgca ctcatggtta gaggaaatgt
1081 acaaatttca gatcttcgta gaaatattga aagattaaaa ccatctctac aatttgtctc
1141 ctggaatcaa gaaggctgga agaccagcct gtgttccgta cctcctgtgg gccattctca
1201 ttcgttatta gctttagcaa ataacacatg tgtgaagccc accttcatgg aactgaaaga
1261 gagattcatg aggctctaca agaaaaaggc tcaccttcat cactatctac aagttgaagg
1321 gatggaagaa agctgtttca cagaagctgt gtcatcttta tcagcactca tacaggaata
1381 tgaccaactg gacgccacaa aaaacatgcc tgtgcaggat ttacccagac taagcatagc
1441 tatgtgaaaa agaaaccctc aaaaatactt tcttaatttc acattgtttt ttctgacctt
1501 tctgtttcaa catttttgta atttggaaac tccagttttt tcatattatc gggaaatatt
1561 tttgtctaaa agagtgattt ctgtttaatc gcaatttgtt ggtaatacca atgtgtgaaa
1621 ttagtgaaat cttagtacct taacttcaaa catttctctt cagaaaagtt cccttttcta
1681 aaattgagat aacatagttc ttgaatattt tgctgtattt atagcctcat atttaggcat
1741 ttatgcactg atgtgtcttc aataaaaatc ttgtacagat atatttttat aattatttat
1801 aatttatatt ttgatattct atttaagtta tcctgattct ttaaaagtag ttattgggag
1861 tagaagaaca caatataaat atttccgtgt aatagccacc aacttttcag gcataggttt
1921 tattacaact gttaaggagg ttttgcttct tctttagata acaacttgtt tgcccaaaag
1981 aatcctaatt tgtacactta acatgtattt gtattaaact ttttaaataa ttgctttctt
2041 atcaaaccaa ttgattttat aataaatgtc tatatttttc aaaaaaaaaa aaaaaa
//