LOCUS BC025396 4317 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens spermatogenesis associated 18 homolog (rat), mRNA
(cDNA clone MGC:26952 IMAGE:4821894), complete cds.
ACCESSION BC025396
VERSION BC025396.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4317)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4317)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: c Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21687118.
FEATURES Location/Qualifiers
source 1..4317
/db_xref="H-InvDB:HIT000039926"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26952 IMAGE:4821894"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..4317
/gene="SPATA18"
/gene_synonym="FLJ32906"
/db_xref="GeneID:132671"
/db_xref="HGNC:HGNC:29579"
CDS 282..1898
/gene="SPATA18"
/gene_synonym="FLJ32906"
/codon_start=1
/product="spermatogenesis associated 18 homolog (rat)"
/protein_id="AAH25396.1"
/db_xref="GeneID:132671"
/db_xref="HGNC:HGNC:29579"
/translation="MAENLKRLVSNETLRTLQEKLDFWLKEYNTNTCDQNLNHCLELI
EQVAKVQGQLFGILTAAAQEGGRNDGVETIKSRLLPWLEASFTAASLGKSVDSKVPSL
QDTFDRERHKDPSPRDRDMQQLDSNLNSTRSQCNQVQDDLVETEKNLEESKNRSAISL
LAAEEEINQLKKQLKSLQAQEDARHRNTDQRSSENRRSEPWSLEERKREQWNSLKQNA
DQQDTEAMSDYKKQLRNLKEEIAVLSAEKSALQGRSSRSRSPSPAPRSRSCSRSRSAS
PSTAVKVRRPSPNRSKLSNVARKAALLSRFSDSYSQARLDAQCLLRRCIDKAETVQRI
IYIATVEAFHVAKMAFRHFKIHVRKSLTPSYVGSNDFENAVLDYVICHLDLYDSQSSV
NDVIRAMNVNPKISFPPVVDFCLLSDFIQEICCIAFAMQALEPPLDIAYGADGEVFND
CKYRRSYDSDFTAPLVLYHVWPALMENDCVIMKGEAVTRRGAFWNSVRSVSRCRSRSL
SPICPRSQIGLNTMSRSRSPSPIRCGLPRF"
BASE COUNT 1228 a 948 c 933 g 1208 t
ORIGIN
1 agcgggtatc tatggccggg ctcaggcggc tgctggggag ccaggagacc gcgcgggacg
61 gcggatgagg cgcggcggct gcggcccagg gcacctcccc tctggcttcc cgaacccggc
121 caggtccgac ccgaggggga ggatggaaac acctgccgcg ctctgagccc cccagaagag
181 aacacccttc ccgccatatc accccacggt cctgcggagg ccaccgcctg gtccccccaa
241 gtctccatcg cgcagcgtgg ggccgagagg aatagtgagc gatggcggaa aacctgaaaa
301 gactggtctc aaacgaaact ttacgaacgt tgcaggaaaa gctagacttc tggctgaagg
361 agtacaacac aaacacgtgt gatcaaaatc taaaccattg ccttgaactc attgagcaag
421 ttgccaaggt gcagggacaa ctctttggga tcctcacagc agcagcccaa gaaggaggac
481 gtaatgatgg tgtggaaaca atcaagtcac gccttttgcc ttggctggag gcttccttta
541 ctgctgcttc cctgggaaaa tctgttgaca gcaaggtccc ctctctgcag gacacgtttg
601 atagggagag acataaagat cccagtcctc gggatcggga tatgcaacag ttagactcta
661 atttgaactc aacccggagt caatgcaacc aggttcaaga cgatctggtt gaaactgaaa
721 agaatcttga agaaagcaag aacagatcgg ccatatccct tttggctgca gaggaggaaa
781 taaatcagct gaaaaagcag cttaaatctc ttcaagctca ggaggatgcc cgccacagaa
841 acacagatca gaggagctca gagaataggc ggtcagagcc ttggagcttg gaggagcgga
901 agcgtgagca gtggaactca ctcaagcaga atgcagacca gcaggacaca gaagccatgt
961 ccgattataa gaaacagctc cgaaacctga aggaggagat agctgttctg tctgctgaga
1021 aaagtgcact ccaaggaagg tcctccagga gccggtctcc cagccctgcc cctcgcagcc
1081 gtagctgcag ccgcagcaga tctgccagcc cctccaccgc tgtcaaggtc aggagaccgt
1141 ccccaaaccg ctccaagctg tccaatgtgg cgcgcaaggc tgccctcttg tcccggttca
1201 gcgattccta ttcccaggcc cgcctggacg cgcagtgcct gctgcggcgc tgcatcgaca
1261 aggctgagac cgttcagcgg atcatctaca tcgccacagt ggaggcattc catgtagcaa
1321 aaatggcatt cagacacttc aagatccatg tgagaaaatc gttgacacca tcttatgtgg
1381 ggtcgaatga ctttgagaat gctgtcttgg attatgtcat ttgtcatctt gatctatatg
1441 attctcaaag cagtgtcaat gatgtgatcc gagccatgaa tgtcaatccc aagatttcat
1501 tccctcctgt cgttgacttt tgccttctca gtgacttcat ccaggagata tgttgcattg
1561 cctttgcaat gcaggcctta gaaccacccc tagatattgc atatggagca gatggagaag
1621 tttttaatga ttgcaaatac cgccgcagct acgactcgga tttcactgct cccttagtcc
1681 tctatcacgt gtggcctgct ctcatggaga atgactgtgt cattatgaag ggagaagctg
1741 tcaccaggag aggggctttt tggaattcgg tgcgatctgt aagtcgttgt cgaagcagga
1801 gtttaagtcc catttgcccc cgtagccaaa ttggtttaaa cacgatgtct cgaagtcgga
1861 gtccttctcc aataagatgt ggattgccaa gattttaaaa gcaccagacc tgctcctttg
1921 acccagtgcg tggaaacagc tgctttctcc agtgccgcca tctgtcttct gtgtctgcct
1981 cagacctcac ttaagataat gtcaaaaggc aattctgtgt atcaccccac acagagagtt
2041 aaatgttttg gcttggcgca tttgtaactt tagatatatt gcattctatt ttattttata
2101 gatactaatt ccattaattt cataaaaatg attgtatagg catttaggat catattcatt
2161 cgaagcaaag tccgttacaa aggttcaaga tttccatctc aaaacactac gctcttttat
2221 gggaactgtg tgaactgaag tggaaagcat ctaccatgct gaggctaaaa gaaaagatga
2281 atcattttag tttgcagatg gatcgtaaat ataattgttg gtatcagctt tagctcaaaa
2341 ccaatattag gtgttttaat ttccttttaa ggtttggaag acagccctaa tctcaggttg
2401 gggagctcat gttagtagca gtgacttaag gctaagtgta gaagataatt taagatacat
2461 tttctttata tattagccaa caaattatat ttattggttg gcttgctttt ccgttctgat
2521 tttgagagtg cccagtttgg tttagttgac caatgaatgt caaagctact tagttgagag
2581 aatttccttg ttcataaatg tagagcagtg atttgattag aagccagctt tgagataaat
2641 gttaattacc tcatgcatat ctcctgggaa tatttcaaac tgttttaatg catgtgttat
2701 atataaaagt ttcttgggac atgctcttca cctgttctac ctagttattt gcaaattcag
2761 acctcctatt gaactctgtc tgaccaaaac tacttaaact caaggcccaa aactaggggc
2821 accatttact gattttaaat tgagtatata tcccttgact tcttcactgt caaatacttt
2881 tgaaacttca cgttcaagat aagaatggaa tgttgctttc ttgcaataag taatgttctt
2941 tctgcctttt tttcactttt aagtcagcct taaacacatg cctcacaaac atctactttc
3001 tccacatacc tttgagagag acactgaatt ggcctcagct cagttttgca taagcttagt
3061 gccagaacca gcacctgatg cttttcaggt gaaaataaaa caaacagctt ctctaaagca
3121 tcttacccct gtgctggagg tttgagggac ctcttcagtg cctgcccctt gagtctaatg
3181 gtcaccacct cattctgaag tatgagttga attttttgcc ctctttgcat atttacatta
3241 gtcatcactt tgaagcaatg cagtgtgctg gaaggagcac tatctgccta ggtaactgct
3301 agtcatgacc tggtcatcag cttgctttgt ggcactgagc aagttacttc acttctctga
3361 gccttggttt tatcataggg tgaggaggtt ggatacaatt agtgcccccc ttaaccctgc
3421 agactcaatg ttccctttta taacaagtat tttattctga atatgaaatg aaaattaaag
3481 ttaatataat catctatgtg catgtataat tttaagcagt gaacatagta ccctaactat
3541 aatataaagc agaaaaaaag gcaactttta ataaaataaa atgtatttca ataaaaaagc
3601 ttgggtataa ccaccctaga agataaaatt aagtcattag atggctgaac ctgcatgtag
3661 agccaccagc tacaaatgaa aatcaatgtg tgtattggca acagaaaatc acggtgttgt
3721 cattggatgt gactttctga agtggtgggc aattcttgtt aatgttttaa acaaaaaaaa
3781 aaacacctta cagtcttgcc ctgatttaca cagcagtcac attcctggaa aattcaagtg
3841 tttattaaaa ctatgcaaca gttactgtgt gttatacgtt gaaaggtctt cactaatatc
3901 tcactaagta atgagaatgc ctacatatca gaattttttt tttcaggagc caagcacata
3961 tactgatttg gaaaaaggca caggtagctc agtttatttg ctttctaccc tgcctggcca
4021 cttgctgttt cttcagtttc taatttgagc tgtaactaca caaggaaagc taaatagtct
4081 ggaaaatttt tggaaagaat ccacaaagcc aaaggagact ggcctatact cattttatct
4141 ggggatgtac cttaccctta gagactttga aaaatgtgaa gctcttattt tgtaacctgg
4201 gtaaatgtta gtttctagat tttcggctta acatctaata ataacattta aaaagtgctt
4261 ttgtaactat tagttatttg caataaaatg ctttccttct acaaaaaaaa aaaaaaa
//