LOCUS BC025338 1627 bp mRNA linear HTC 13-APR-2006
DEFINITION Homo sapiens homeo box A11, antisense, mRNA (cDNA clone
IMAGE:4865533), containing frame-shift errors.
ACCESSION BC025338
VERSION BC025338.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1627)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1627)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: h Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: GenomeScan gene prediction
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..1627
/db_xref="H-InvDB:HIT000091045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4865533"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 357 a 484 c 459 g 327 t
ORIGIN
1 gccacctcag gggaagcaac agatcgtcac tcggtgttct caccgaaagc acgtaatcgc
61 cggtgtaact catgttggct ggggggcctc ccggcgcgcg cggagaggct ggggtgcgcc
121 cccatgcagc atgcttgtgc tcaattgcag ggtcctcgtt ctcgagtgtg cagagggcgg
181 tgagagctca actctcgtcc ccacctccca cccgcagctc cccgggtggg tgagggatgc
241 cctggactgg ggatagccag gtgggagtcc gtcgctgtgt ggcctgtggt ctcggagtct
301 gttctcctgg agtctcgcat ttgcaccccc ttcttcgcag tccccctccc atagacttgc
361 tctgggaagc gcctctgcct ccgaccctag ccggaacccc ttcggggcca gagtttgaag
421 ccgtggatgt gcctgcctgg tggcttgtcc gatttgcacg gtgacttgat tacactctct
481 cattcatggt cacttccgaa gcgctttagt gccttccgtc cctaaaccgc ctacagccag
541 aacggcttct ccccgcggtt tgtcactgat ccgcagggcc cggaagggcc ttcgtcttac
601 ccgggatcca cctctcccct catcttccct gcctacctct tcatcccacc ttctgtcctt
661 ggagaaactc cctcctcctc gctgcctgcc gggcttcgga gtgactcggc agagacagag
721 gcacaggggc tgccctgctg ctcaccggtc cacccatctg cctggtcttc tggagctgag
781 gactcgggaa accatgcaat tgaggcaagc cttgggctgc tttagaggcg ctgacatccg
841 aggagacttc tcctgggagg tccaacagcc gagcttagcc caccgggctc tgggaaagac
901 ccgactgagg ctaaagccgc cccggaaggc caagtccgag ttccatttct tgaagaggcc
961 ggcgcgcgta aggctgtgac attggccctg gcgactggct tcccaggagc tgttctttct
1021 caggagctcc acagcgcggg ccatctccag aaaactgtct tcagagtgta tttcctttta
1081 tcgtcaaccc agagccccac cgcggctaat gcaagaggcc aaaaaatgtt tggaggaaga
1141 aaaacaaagg caggaagtgg cggcggcctg acggtgcgtg tgtgtctgca gagaagggag
1201 ggagccggct cagtctcttc ttgtttttcc aaacttcaag gtccaggcag ccctctgcag
1261 ggccgggccc cattgctccc cgcgcggcat tggaggtggc cgccggagag gagaaggcca
1321 acgcctgcgc caggcttgtc aggcggaaac ggctaacaag gagatttggt cagcaaaaca
1381 gacccagcct ttccgaggct tcgtctgact tggcccgaaa ggttggggag ggggggcttg
1441 cgcagagcct cagggaccct cctctctggg gactaccatc cctgagcctt acgcttcttt
1501 ccacagcctt tgcaggcgga atatcggaat aaagtgggtc caggcgccaa aaaaaaaaaa
1561 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1621 aaaaaaa
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