LOCUS BC025335 2473 bp mRNA linear HTC 19-NOV-2003
DEFINITION Homo sapiens lysosomal-associated membrane protein 1, mRNA (cDNA
clone IMAGE:4583687).
ACCESSION BC025335
VERSION BC025335.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2473)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2473)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steven Jones, Jennifer Asano, Ian Bosdet, Yaron Butterfield,
Susanna Chan, Readman Chiu, Chris Fjell, Erin Garland, Ran Guin,
Letticia Hsiao, Martin Krzywinski, Reta Kutsche, Oliver Lee, Soo
Sen Lee, Victor Ling, Carrie Mathewson, Candice McLeavy, Steven
Ness, Pawan Pandoh, Anna-Liisa Prabhu, Parvaneh Saeedi, Jacqueline
Schein, Duane Smailus, Michael Smith, Lorraine Spence, Jeff Stott,
Michael Thorne, Miranada Tsai, Natasja van den Bosch, Jill Vardy,
George Yang, Scott Zuyderduyn, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: e Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction
This clone has the following problem: no 5' EST match.
FEATURES Location/Qualifiers
source 1..2473
/db_xref="H-InvDB:HIT000091043"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4583687"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 531 a 676 c 686 g 580 t
ORIGIN
1 gtgacaagcg ctgccggccg cggtgtcttc ttcgtgccgg cgtcgcagtg gccgggcctc
61 ttgcgtctgg taacgccgct gtctctaacg ccagcccttg gcgcccgcgc cccgccaccg
121 cagcgcccgg cagtccgcgg cccaaccgcc gcccgcgccc ccgctctccg caccgtaccc
181 ggccgcctcg cgccatggcg gcccccggca gcgcccggcg acccctgctg ctgctactgc
241 tgttgctgct gctcggcctc atgcattgtg cgtcagcagc aatgtttatg gtgaaaaatg
301 gcaacgggac cgcgtgcata atggccaact tctctgctgc cttctcagtg aactacgaca
361 ccaagagtgg ccctaagaac atgacctttg acctgccatc agatgccaca gtggtgctca
421 accgcagctc ctgtggaaaa gagaacactt ctgaccccag tctcgtgatt gcttttggaa
481 gaggacatac actcactctc aatttcacga gaaatgcaac acgttacagc gtccagctca
541 tgagttttgt ttataacttg tcagacacac accttttccc caatgcgagc tccaaagaaa
601 tcaagactgt ggaatctata actgacatca gggcagatat agataaaaaa tacagatgtg
661 ttagtggcac ccaggtccac atgaacaacg tgaccgtaac gctccatgat gccaccatcc
721 aggcgtacct ttccaacagc agcttcagca ggggagagac acgctgtgaa caagacaggc
781 cttccccaac cacagcgccc cctgcgccac ccagcccctc gccctcaccc gtgcccaaga
841 gcccctctgt ggacaagtac aacgtgagcg gcaccaacgg gacctgcctg ctggccagca
901 tggggctgca gctgaacctc acctatgaga ggaaggacaa cacgacggtg acaaggcttc
961 tcaacatcaa ccccaacaag acctcggcca gcgggagctg cggcgcccac ctggtgactc
1021 tggagctgca cagcgagggc accaccgtcc tgctcttcca gttcgggatg aatgcaagtt
1081 ctagccggtt tttcctacaa ggaatccagt tgaatacaat tcttcctgac gccagagacc
1141 ctgcctttaa agctgccaac ggctccctgc gagcgctgca ggccacagtc ggcaattcct
1201 acaagtgcaa cgcggaggag cacgtccgtg tcacgaaggc gttttcagtc aatatattca
1261 aagtgtgggt ccaggctttc aaggtggaag gtggccagtt tggctctgtg gaggagtgtc
1321 tgctggacga gaacagcatg ctgatcccca tcgctgtggg tggtgccctg gcggggctgg
1381 tcctcatcgt cctcatcgcc tacctcgtcg gcaggaagag gagtcacgca ggctaccaga
1441 ctatctagcc tggtgcacgc aggcacagca gctgcagggg cctctgttcc tttctctggg
1501 cttagggtcc tgtcgaaggg gaggcacact ttctggcaaa cgtttctcaa atctgcttca
1561 tccaatgtga agttcatctt gcagcattta ctatgcacaa cagagtaact atcgaaatga
1621 cggtgttaat tttgctaact gggttaaata ttttgctaac tggttaaaca ttaatattta
1681 ccaaagtagg attttgaggg tgggggtgct ctctctgagg gggtgggggt gccgctgtct
1741 ctgaggggtg ggggtgccgc tgtctctgag gggtgggggt gccgctctct ctgagggggt
1801 gggggtgccg ctttctctga gggggtgggg gtgccgctct ctctgagggg gtgggggtgc
1861 tgctctctcc gaggggtgga atgccgctgt ctctgagggg tgggggtgcc gctctaaatt
1921 ggctccatat catttgagtt tagggttctg gtgtttggtt tcttcattct ttactgcact
1981 cagatttaag ccttacaaag ggaaagcctc tggccgtcac acgtaggacg catgaaggtc
2041 actcgtggtg aggctgacat gctcacacat tacaacagta gagagggaaa atcctaagac
2101 agaggaactc cagagatgag tgtctggagc gcttcagttc agctttaaag gccaggacgg
2161 gccacacgtg gctggcggcc tcgttccagt ggcggcacgt ccttgggcgt ctctaatgtc
2221 tgcagctcaa gggctggcac ttttttaaat ataaaaatgg gtgttatttt tatttttttt
2281 tgtaaagtga tttttggtct tctgttgaca ttcggggtga tcctgttctg cgctgtgtac
2341 aatgtgagat cggtgcgttc tcctgatgtt ttgccgtggc ttggggattg tacacgggac
2401 cagctcacgt aatgcattgc ctgtaacaat gtaataaaaa gcctctttct tttaaaaaaa
2461 aaaaaaaaaa aaa
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