LOCUS BC025334 1366 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chromosome X open reading frame 38, mRNA (cDNA clone
MGC:39350 IMAGE:4559938), complete cds.
ACCESSION BC025334
VERSION BC025334.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1366)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1366)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: d Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21450662.
FEATURES Location/Qualifiers
source 1..1366
/db_xref="H-InvDB:HIT000039901"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39350 IMAGE:4559938"
/tissue_type="Kidney, renal cell adenocarcinoma"
/clone_lib="NIH_MGC_14"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1366
/gene="CXorf38"
/gene_synonym="MGC39350"
/db_xref="GeneID:159013"
/db_xref="HGNC:HGNC:28589"
CDS 6..965
/gene="CXorf38"
/gene_synonym="MGC39350"
/codon_start=1
/product="chromosome X open reading frame 38"
/protein_id="AAH25334.1"
/db_xref="GeneID:159013"
/db_xref="HGNC:HGNC:28589"
/translation="MVLSELAARLNCAEYKNWVKAGHCLLLLRSCLQGFVGREVLSFH
RGLLAAAPGLGPRAVCRGGSRCSPRARQFQPQCQVCAEWKREILRHHVNRNGDVHWGN
CRPGRWPVDAWEVAKAFMPRGLADKQGPEECDAVALLSLINSCDHFVVDRKKVTEVIK
CRNEIMHSSEMKVSSTWLRDFQMKIQNFLNEFKNIPEIVAVYSRIEQLLTSDWAVHIP
EEDQRDGCECEMGTYLSESQVNEIEMQLLKEKLQEIYLQAEEQEVLPEELSNRLEVVK
EFLRNNEDLRNGLTEDMQKLDSLCLHQKLDSQEPGRQTPDRKA"
BASE COUNT 400 a 312 c 350 g 304 t
ORIGIN
1 gagacatggt gctgtcggag ctagcggcgc gcctcaactg cgccgagtac aagaactggg
61 tgaaggcggg ccactgcctg ctactgctgc gcagctgcct gcagggtttc gtcggccgcg
121 aggtgctctc cttccaccgc ggcctactcg ccgcagcccc cggcctgggg ccccgcgccg
181 tctgccgcgg cggctcacgg tgcagccctc gcgcccgcca gtttcagcct cagtgtcagg
241 tgtgcgctga atggaaaagg gagattttga gacatcatgt caacagaaat ggagatgtgc
301 actggggaaa ctgccggccg ggccgctggc ccgtggacgc ctgggaggtg gccaaggcct
361 tcatgccccg aggactagca gacaaacaag gacctgagga atgtgatgca gttgctcttt
421 taagtctcat caactcctgc gatcacttcg tggttgatcg aaagaaagtc acagaggtaa
481 ttaaatgtcg taatgagatc atgcactctt cagagatgaa agtatcttct acgtggcttc
541 gagattttca gatgaagatc caaaattttc tgaatgaatt caagaacatc ccagagattg
601 tggcagtata ctccagaata gaacagctgt tgacgtctga ctgggctgtt cacatccccg
661 aggaagatca gcgagatggg tgtgaatgtg aaatgggaac ttacctgagt gagagccaag
721 tcaatgaaat agaaatgcag ttactaaagg agaaacttca agagatatat cttcaagcag
781 aagaacaaga ggtgttgcct gaagagctct caaatcgact ggaagtggtg aaggaatttc
841 tgagaaacaa tgaggatctt agaaatggcc ttacagaaga tatgcagaag ctagacagcc
901 tctgtctaca tcaaaaactg gattcacagg aacctgggag acaaacacct gacaggaagg
961 cctgaggttg cccgtcaaca aaaatcaggc atgttctgtg aaagtcagca tggcttccat
1021 ctcagacatc cttttctgtg caaaaggaaa aagttaccag agtattgtac ccaaacaaaa
1081 aggaattttt gttgttttgt cctggacttt cctctaactc tttggaacta ttttaatatt
1141 tataaacttg gggttgtata atctattgca ataaaaaata ttagatactc tatgccaaaa
1201 cttgctacca ggccaggtgt gatggctcac acctgtaatc cccagcactt tgggaggcca
1261 aggcgggcgg atcacctgag gtcaggagtt cgagaccagc ctggccaaca tggcgaaacc
1321 ccatctctac ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//