LOCUS BC025330 3110 bp mRNA linear HUM 02-DEC-2006
DEFINITION Homo sapiens chromosome 14 open reading frame 43, mRNA (cDNA clone
IMAGE:4111658), partial cds.
ACCESSION BC025330
VERSION BC025330.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3110)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3110)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: c Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 44890061.
FEATURES Location/Qualifiers
source 1..3110
/db_xref="H-InvDB:HIT000091040"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4111658"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>3110
/gene="C14orf43"
/gene_synonym="c14_5541"
/gene_synonym="FLJ00335"
/gene_synonym="LSR68"
/db_xref="GeneID:91748"
/db_xref="HGNC:HGNC:19853"
CDS 35..>3110
/gene="C14orf43"
/gene_synonym="c14_5541"
/gene_synonym="FLJ00335"
/gene_synonym="LSR68"
/codon_start=1
/product="C14orf43 protein"
/protein_id="AAH25330.1"
/db_xref="GeneID:91748"
/db_xref="HGNC:HGNC:19853"
/translation="MNLQAQPKAQNKRKRCLFGGQEPAPKEQPPPLQPPQQSIRVKEE
QYLGHEGPGGAVSTSQPVELPPPSSLALLNSVVYGPERTSAAMLSQQVASVKWPNSVM
APGRGPERGGGGGVSDSSWQQQPGQPPPHSTWNCHSLSLYSATKGSPHPGVGVPTYYN
HPEALKREKAGGPQLDRYVRPMMPQKVQLEVGRPQAPLNSFHAAKKPPNQSLPLQPFQ
LAFGHQVNRQVFRQGPPPPNPVAAFPPQKQQQQQQPQQQQQQQQAALPQMPLFENFYS
MPQQPSQQPQDFGLQPAGPLGQSHLAHHSMAPYPFPPNPDMNPELRKALLQDSAPQPA
LPQVQIPFPRRSRRLSKEGILPPSALDGAGTQPGQEATGNLFLHHWPLQQPPPGSLGQ
PHPEALGFPLELRESQLLPDGERLAPNGREREAPAMGSEEGMRAVSTGDCGQVLRGGV
IQSTRRRRRASQEANLLTLAQKAVELASLQNAKDGSGSEEKRKSVLASTTKCGVEFSE
PSLATKRAREDSGMVPLIIPVSVPVRTVDPTEAAQAGGLDEDGKGPEQNPAEHKPSVI
VTRRRSTRIPGTDAQAQAEDMNVKLEGEPSVRKPKQRPRPEPLIIPTKAGTFIAPPVY
SNITPYQSHLRSPVRLADHPSERSFELPPYTPPPILSPVREGSGLYFNAIISTSTIPA
PPPITPKSAHRTLLRTNSAEVTPPVLSVMGEATPVSIEPRINVGSRFQAEIPLMRDRA
LAAADPHKADLVWQPWEDLESSREKQRQVEDLLTAACSSIFPGAGTNQELALHCLHES
RGDILETLNKLLLKKPLRPHNHPLATYHYTGSDQWKMAERKLFNKGIAIYKKDFFLVQ
KLIQTKTVAQCVEFYYTYKKQVKIGRNGTLTFGDVDTSDEKSAQEEVEVDIKTSQKFP
RVPLPRRESPSEERLEPKREVKEPRKEGEEEVPEIQEKEEQEEGRERSRRAAAVKATQ
TLQANESASDILILRSHESNAPGSAGGQASEKPREGTGKSRRALPFSEKKKKK"
BASE COUNT 715 a 1004 c 914 g 477 t
ORIGIN
1 gggatctcac cgccagggct cagttggcca catcatgaac ctccaggccc agcccaaggc
61 tcagaacaag cggaagcgtt gcctcttcgg gggccaggaa ccagctccca aggagcagcc
121 ccctcccctg cagccccccc agcagtccat cagagtgaag gaggagcagt acctcgggca
181 cgagggtcca ggaggggcag tctccacctc tcagcctgtg gaactgcccc ctcctagcag
241 cctggccctg ctgaactctg tggtgtatgg gcctgagcgg acctcagcag ccatgctgtc
301 ccagcaggtg gcctcagtaa agtggcccaa ctctgtgatg gctccagggc ggggcccgga
361 gcgtggagga ggtgggggtg tcagtgacag cagctggcag cagcagccag gccagcctcc
421 accccattca acatggaact gccacagtct gtccctctac agtgcaacca aggggagccc
481 gcatcctgga gtgggagtcc cgacttacta taaccaccct gaggcactga agcgggagaa
541 agcggggggc ccacagctgg accgctatgt gcgaccaatg atgccacaga aggtgcagct
601 ggaggtaggg cggccccagg cacccctgaa ttctttccac gcagccaaga aacccccaaa
661 ccagtcactg cccctgcaac ccttccagct ggcattcggc caccaggtga accggcaggt
721 cttccggcag ggcccaccgc ccccaaaccc ggtggctgcc ttccctccac agaagcagca
781 gcagcagcag caaccacagc agcagcagca gcagcagcag gcagccctac cccagatgcc
841 gctctttgag aacttctatt ccatgccgca gcaaccctcg cagcaacccc aggactttgg
901 cctgcagcca gctgggccac tgggacagtc ccacctggct caccacagca tggcacccta
961 ccccttcccc cccaacccag atatgaaccc agaactgcgc aaggcccttc tgcaggactc
1021 agccccgcag ccagcgctac ctcaggtcca gatccccttc ccccgccgct cccgccgcct
1081 ctctaaggag ggtatcctgc ctcccagcgc cctggatggg gctggcaccc agcctgggca
1141 ggaggccact ggcaacctgt tcctacatca ctggcccctg cagcagccgc cacctggctc
1201 cctggggcag ccccatcctg aagctctggg attcccgctg gagctgaggg agtcgcagct
1261 actgcctgat ggggagagac tagcacccaa tggccgggag cgagaggctc ctgccatggg
1321 cagcgaggag ggcatgaggg cagtgagcac aggggactgt gggcaggtgc tacggggcgg
1381 agtgatccag agcacgcgac ggaggcgccg ggcatcccag gaggccaatt tgctgaccct
1441 ggcccagaag gctgtggagc tggcctcact gcagaatgca aaggatggca gtggttctga
1501 agagaagcgg aaaagtgtat tggcctcaac taccaagtgt ggggtggagt tttctgagcc
1561 ttccttagcc accaagcgag cacgagaaga cagtgggatg gtacccctca tcatcccagt
1621 gtctgtgcct gtgcgaactg tggacccaac tgaggcagcc caggctggag gtcttgatga
1681 ggacgggaag ggtcctgaac agaaccctgc tgagcacaag ccatcagtca tcgtcacccg
1741 caggcggtcc acccgaatcc ccgggacaga tgctcaagct caggcggagg acatgaatgt
1801 caagttggag ggggagcctt ccgtgcggaa accaaagcag cggcccaggc ccgagcccct
1861 catcatcccc accaaggcgg gcactttcat cgcccctccc gtctactcca acatcacccc
1921 ataccagagc cacctgcgct ctcccgtgcg cctagctgac cacccctctg agcggagctt
1981 tgagctacct ccctacacgc cgccccccat cctcagccct gtgcgggaag gctctggcct
2041 ctacttcaat gccatcatat caaccagcac catccctgcc cctcctccca tcacgcctaa
2101 gagtgcccat cgcacgctgc tccggactaa cagtgctgaa gtaaccccgc ctgtcctctc
2161 tgtgatgggg gaggccaccc cagtgagcat cgagccacgg atcaacgtgg gctcccggtt
2221 ccaggcagaa atccccttga tgagggaccg tgccctggca gctgcagatc cccacaaggc
2281 tgacttggtg tggcagccat gggaggacct agagagcagc cgggagaagc agaggcaagt
2341 ggaagacctg ctgacagccg cctgctccag cattttccct ggtgctggca ccaaccagga
2401 gctggccctg cactgtctgc acgaatccag aggagacatc ctggaaacgc tgaataagct
2461 gctgctgaag aagcccctgc ggccccacaa ccatccgctg gcaacttatc actacacagg
2521 ctctgaccag tggaagatgg ccgagaggaa gctgttcaac aaaggcattg ccatctacaa
2581 gaaggatttc ttcctggtgc agaagctgat ccagaccaag accgtggccc agtgcgtgga
2641 gttctactac acctacaaga agcaggtgaa aatcggccgc aatgggactc taacctttgg
2701 ggatgtggat acgagcgatg agaagtcggc ccaggaagag gttgaagtgg atattaagac
2761 ttcccaaaag ttcccaaggg tgcctcttcc cagaagagag tccccaagtg aagagaggct
2821 ggagcccaag agggaggtga aggagcccag gaaggagggg gaggaggagg tgccagagat
2881 ccaagagaag gaggagcagg aagaggggcg agagcgcagc aggcgggcag cggcagtcaa
2941 agccacgcag acactacagg ccaatgagtc ggccagtgac atcctcatcc tccggagcca
3001 cgagtccaac gcccctgggt ctgccggtgg ccaggcctcg gagaagccaa gggaagggac
3061 agggaagtca cgaagggcac tacctttttc agaaaaaaaa aaaaaaaaaa
//