LOCUS BC025313 1691 bp mRNA linear HTC 09-JUN-2008
DEFINITION Homo sapiens nuclear casein kinase and cyclin-dependent kinase
substrate 1, mRNA (cDNA clone IMAGE:4860149), with apparent
retained intron.
ACCESSION BC025313
VERSION BC025313.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1691)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1691)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: Similarity but not
identity to protein
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1691
/db_xref="H-InvDB:HIT000091030"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4860149"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 481 a 278 c 366 g 566 t
ORIGIN
1 cttttcttta aacttcagtt tacgagatgc tttgagagcg ttaggcaaaa gcagaaataa
61 atatcaggag caacggggaa agctttataa aagatcatgg tggccactgt tgcagctttg
121 aagaatgagt gctggcttga acagttcttt gcctgcatca ttggtagctg cactgaaagg
181 aaaaaacttt caccttaaga atttgaaaag gaagaaacct gggctctggt cttcatggca
241 tttagactga gatgcttaaa cagaacagaa gtaatacgca tttcctgcca taggataggg
301 aaaatgtaac aagctggttg ctcttgaggt tagaaaattg tctgtttctc tgtggatgaa
361 gctggattta cttgaaaatg gagagttggc ttattgtttg aatattggga catcaagcta
421 tctatagcca agtttcagtc gcaaccagtt ttccctttgt ctggggtaaa ttcgatacaa
481 aatgattctt tttgaatcct gaatccataa attacacttt ttttttcaaa ttcacaaaat
541 tcacagtggt gctgactgtg taataaccac tattgggaaa catcccgtaa acctgcctgt
601 tgccatgcca atggagtgac tgaactggtg acatctgttt gagcatgctt tgtgtggctg
661 gtagaatgcc accgttgtgc atacactttg tacatcaggg gtgaagggag ggttttctag
721 attattgggg gagggtaaaa ttgggatttt tttgttgttc cttttttgat ggggtgtggg
781 ggtatagtac tcagcttatg ccctaaaata acatgtataa aaacccctga agtattgtgt
841 gggtgtgtac gtgtgagtgt gtgtttgtat acgtctggca attaaagctt tgtcttctgg
901 aacttagtga attcttttct ctttttcctc cagaagtatt tgttacaaga tttgtaaata
961 agagctctac ttagtttgtt taccatgaac atgttgcagc aaaccttatg catctaattc
1021 ctacaaggtt aaagaaaggc ttttagactt gccaggttaa gcaacagcca agttctcagt
1081 aattgtttgc cttgatttat cttttagact tcattttgcc agctctaaaa ctcccagtct
1141 tccttgattt tagtccttaa tcttttatgt tctgagcagg aagggtaaaa gacaggaacc
1201 tgcttcactg tattaactag tccatgggct gagaccgggg catctctttt cttcatactg
1261 caatgttgct agatacatga tcagacacca gagggttggg cattcttgca ataccttaac
1321 agtgctgaaa tctgcagcat ggtactaagg aagttaaagt ttgaatgtaa ccactttatt
1381 taaaaggttt ttttctttaa tttaaatgaa atggggttga agtgaacatg attttgttga
1441 ccatgttcgt gaattacaga tgcaacatgc attggtagaa tcgtgtgatg gtcttttgtg
1501 atacttaatt tttacatatc ccagtctctg tatgtatctg catagacaaa gaaaaaacaa
1561 actcctgctt tgcttttatt gaagggtttc caggactgcg tgtctgctcc tgagctctgt
1621 tttaagtatg tgtatccttt gcttgtattt tgtattaaaa aaataagaaa aagaaaaaaa
1681 aaaaaaaaaa a
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