LOCUS       BC025310                1832 bp    mRNA    linear   HUM 12-FEB-2004
DEFINITION  Homo sapiens leucine rich repeat and fibronectin type III domain
            containing 1, mRNA (cDNA clone IMAGE:3626429), partial cds.
ACCESSION   BC025310
VERSION     BC025310.1
KEYWORDS    .
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1832)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1832)
  AUTHORS   Strausberg,R.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-MAR-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
            Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
            Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
            Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
            Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
            Schein, Asim Siddiqui, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 42 Row: a Column: 23
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Similarity but not
            identity to protein.
FEATURES             Location/Qualifiers
     source          1..1832
                     /db_xref="H-InvDB:HIT000091029"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="IMAGE:3626429"
                     /tissue_type="Uterus, endometrium adenocarcinoma"
                     /clone_lib="NIH_MGC_44"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            <1..1832
                     /gene="LRFN1"
                     /gene_synonym="KIAA1484"
                     /db_xref="GeneID:57622"
     CDS             <1..1629
                     /gene="LRFN1"
                     /gene_synonym="KIAA1484"
                     /codon_start=1
                     /product="LRFN1 protein"
                     /protein_id="AAH25310.1"
                     /db_xref="GeneID:57622"
                     /translation="LFLRSQGTGPKPPTPLTVSFGGNPLHCNCELLWLRRLTREDDLE
                     TCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGDPEPVV
                     HWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVEVCVVP
                     LPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSAAERRLVAAELTSNSVLIRWPAQRP
                     VPGIRMYQVQYNSSVDDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALP
                     ATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYG
                     DGDSRRVKGSRSLPRVSHVCSQTNGAGTGAAQAPALPAQDHYEALREVESQAAPAVAV
                     EAKAMEAETASAEPEVVLGRSLGGSATSLCLLPSEETSGEESRAAVGPRRSRSGALEP
                     PTSAPPTLALVPGGAAARPRPQQRYSFDGDYGALFQSHSYPRRARRTKRHRSTPHLDG
                     AGGGAAGEDGDLGLGSARACLAFTSTEWMLESTV"
     misc_feature    67..165
                     /gene="LRFN1"
                     /gene_synonym="KIAA1484"
                     /note="LRRCT; Region: Leucine rich repeat C-terminal
                     domain"
                     /db_xref="CDD:smart00082"
     misc_feature    208..468
                     /gene="LRFN1"
                     /gene_synonym="KIAA1484"
                     /note="IGcam; Region: Immunoglobulin domain cell adhesion
                     molecule (cam) subfamily"
                     /db_xref="CDD:cd00931"
     misc_feature    589..813
                     /gene="LRFN1"
                     /gene_synonym="KIAA1484"
                     /note="fn3; Region: Fibronectin type III domain"
                     /db_xref="CDD:pfam00041"
BASE COUNT          350 a          600 c          606 g          276 t
ORIGIN      
        1 ctcttcctga ggtcgcaggg caccgggccc aagccgccca ccccgctgac cgtcagcttc
       61 ggcggcaacc ccctgcactg caactgcgag ctgctctggc tgcggcggct gacccgcgag
      121 gacgacttag agacctgcgc cacgcccgaa cacctcaccg accgctactt ctggtccatc
      181 cccgaggagg agttcctgtg tgagcccccg ctgatcacac ggcaggcggg gggccgggcc
      241 ctggtggtgg aaggccaggc ggtgagcctg cgctgccgag cggtgggtga ccccgagccg
      301 gtggtgcact gggtggcacc tgatgggcgg ctgctgggga actccagccg gacccgggtc
      361 cggggggacg ggacgctgga tgtgaccatc accaccttga gggacagtgg caccttcact
      421 tgtatcgcct ccaatgctgc tggggaagcg acggcgcccg tggaggtgtg cgtggtacct
      481 ctgcctctga tggcaccccc gccggctgcc ccgccgcctc tcaccgagcc cggctcctct
      541 gacatcgcca cgccgggcag accaggtgcc aacgattctg cggctgagcg tcggctcgtg
      601 gcagccgagc tcacctcgaa ctccgtgctc atccgctggc cagcccagag gcctgtgccc
      661 ggaatacgca tgtaccaggt tcagtacaac agttccgttg atgactccct cgtctacagg
      721 atgatcccgt ccaccagtca gaccttcctg gtgaatgacc tggcggcggg ccgtgcctac
      781 gacttgtgcg tgctggcggt ctacgacgac ggggccacag cgctgccggc aacgcgagtg
      841 gtgggctgtg tacagttcac caccgctggg gatccggcgc cctgccgccc gctgagggcc
      901 catttcttgg gcggcaccat gatcatcgcc atcgggggcg tcatcgtcgc ctcggtcctc
      961 gtcttcatcg ttctgctcat gatccgctat aaggtgtatg gcgacgggga cagccgccgc
     1021 gtcaagggct ccaggtcgct cccgcgggtc agccacgtgt gctcgcagac caacggcgca
     1081 ggcacaggcg cggcacaggc cccggccctg ccggcccagg accactacga ggcgctgcgc
     1141 gaggtggagt cccaggctgc ccccgccgtc gccgtcgagg ccaaggccat ggaggccgag
     1201 acggcatccg cggagccgga ggtggtcctt ggacgttctc tgggcggctc ggccacctcg
     1261 ctgtgcctgc tgccatccga ggaaacttcc ggggaggagt ctcgggccgc ggtgggccct
     1321 cgaaggagcc gatccggcgc cctggagcca ccaacctcgg cgccccctac tctagctcta
     1381 gttcctgggg gagccgcggc ccggccgagg ccgcagcagc gctattcgtt cgacggggac
     1441 tacggggcac tattccagag ccacagttac ccgcgccgcg cccggcggac aaagcgccac
     1501 cggtccacgc cgcacctgga cggggctgga gggggcgcgg ccggggagga tggagacctg
     1561 gggctgggct ccgccagggc gtgcctggct ttcaccagca ccgagtggat gctggagagt
     1621 accgtgtgag cggcgggcgg gcgccgggac gcctgggtgc cgcagaccaa acgcccagcc
     1681 gcacggacgc tggggcggga ctgggagaaa gcggctgtgc agacattcaa ttgttattat
     1741 tatgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
//