LOCUS BC025310 1832 bp mRNA linear HUM 12-FEB-2004 DEFINITION Homo sapiens leucine rich repeat and fibronectin type III domain containing 1, mRNA (cDNA clone IMAGE:3626429), partial cds. ACCESSION BC025310 VERSION BC025310.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1832) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1832) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: a Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1832 /db_xref="H-InvDB:HIT000091029" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3626429" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1832 /gene="LRFN1" /gene_synonym="KIAA1484" /db_xref="GeneID:57622" CDS <1..1629 /gene="LRFN1" /gene_synonym="KIAA1484" /codon_start=1 /product="LRFN1 protein" /protein_id="AAH25310.1" /db_xref="GeneID:57622" /translation="LFLRSQGTGPKPPTPLTVSFGGNPLHCNCELLWLRRLTREDDLE TCATPEHLTDRYFWSIPEEEFLCEPPLITRQAGGRALVVEGQAVSLRCRAVGDPEPVV HWVAPDGRLLGNSSRTRVRGDGTLDVTITTLRDSGTFTCIASNAAGEATAPVEVCVVP LPLMAPPPAAPPPLTEPGSSDIATPGRPGANDSAAERRLVAAELTSNSVLIRWPAQRP VPGIRMYQVQYNSSVDDSLVYRMIPSTSQTFLVNDLAAGRAYDLCVLAVYDDGATALP ATRVVGCVQFTTAGDPAPCRPLRAHFLGGTMIIAIGGVIVASVLVFIVLLMIRYKVYG DGDSRRVKGSRSLPRVSHVCSQTNGAGTGAAQAPALPAQDHYEALREVESQAAPAVAV EAKAMEAETASAEPEVVLGRSLGGSATSLCLLPSEETSGEESRAAVGPRRSRSGALEP PTSAPPTLALVPGGAAARPRPQQRYSFDGDYGALFQSHSYPRRARRTKRHRSTPHLDG AGGGAAGEDGDLGLGSARACLAFTSTEWMLESTV" misc_feature 67..165 /gene="LRFN1" /gene_synonym="KIAA1484" /note="LRRCT; Region: Leucine rich repeat C-terminal domain" /db_xref="CDD:smart00082" misc_feature 208..468 /gene="LRFN1" /gene_synonym="KIAA1484" /note="IGcam; Region: Immunoglobulin domain cell adhesion molecule (cam) subfamily" /db_xref="CDD:cd00931" misc_feature 589..813 /gene="LRFN1" /gene_synonym="KIAA1484" /note="fn3; Region: Fibronectin type III domain" /db_xref="CDD:pfam00041" BASE COUNT 350 a 600 c 606 g 276 t ORIGIN 1 ctcttcctga ggtcgcaggg caccgggccc aagccgccca ccccgctgac cgtcagcttc 61 ggcggcaacc ccctgcactg caactgcgag ctgctctggc tgcggcggct gacccgcgag 121 gacgacttag agacctgcgc cacgcccgaa cacctcaccg accgctactt ctggtccatc 181 cccgaggagg agttcctgtg tgagcccccg ctgatcacac ggcaggcggg gggccgggcc 241 ctggtggtgg aaggccaggc ggtgagcctg cgctgccgag cggtgggtga ccccgagccg 301 gtggtgcact gggtggcacc tgatgggcgg ctgctgggga actccagccg gacccgggtc 361 cggggggacg ggacgctgga tgtgaccatc accaccttga gggacagtgg caccttcact 421 tgtatcgcct ccaatgctgc tggggaagcg acggcgcccg tggaggtgtg cgtggtacct 481 ctgcctctga tggcaccccc gccggctgcc ccgccgcctc tcaccgagcc cggctcctct 541 gacatcgcca cgccgggcag accaggtgcc aacgattctg cggctgagcg tcggctcgtg 601 gcagccgagc tcacctcgaa ctccgtgctc atccgctggc cagcccagag gcctgtgccc 661 ggaatacgca tgtaccaggt tcagtacaac agttccgttg atgactccct cgtctacagg 721 atgatcccgt ccaccagtca gaccttcctg gtgaatgacc tggcggcggg ccgtgcctac 781 gacttgtgcg tgctggcggt ctacgacgac ggggccacag cgctgccggc aacgcgagtg 841 gtgggctgtg tacagttcac caccgctggg gatccggcgc cctgccgccc gctgagggcc 901 catttcttgg gcggcaccat gatcatcgcc atcgggggcg tcatcgtcgc ctcggtcctc 961 gtcttcatcg ttctgctcat gatccgctat aaggtgtatg gcgacgggga cagccgccgc 1021 gtcaagggct ccaggtcgct cccgcgggtc agccacgtgt gctcgcagac caacggcgca 1081 ggcacaggcg cggcacaggc cccggccctg ccggcccagg accactacga ggcgctgcgc 1141 gaggtggagt cccaggctgc ccccgccgtc gccgtcgagg ccaaggccat ggaggccgag 1201 acggcatccg cggagccgga ggtggtcctt ggacgttctc tgggcggctc ggccacctcg 1261 ctgtgcctgc tgccatccga ggaaacttcc ggggaggagt ctcgggccgc ggtgggccct 1321 cgaaggagcc gatccggcgc cctggagcca ccaacctcgg cgccccctac tctagctcta 1381 gttcctgggg gagccgcggc ccggccgagg ccgcagcagc gctattcgtt cgacggggac 1441 tacggggcac tattccagag ccacagttac ccgcgccgcg cccggcggac aaagcgccac 1501 cggtccacgc cgcacctgga cggggctgga gggggcgcgg ccggggagga tggagacctg 1561 gggctgggct ccgccagggc gtgcctggct ttcaccagca ccgagtggat gctggagagt 1621 accgtgtgag cggcgggcgg gcgccgggac gcctgggtgc cgcagaccaa acgcccagcc 1681 gcacggacgc tggggcggga ctgggagaaa gcggctgtgc agacattcaa ttgttattat 1741 tatgtaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //