LOCUS BC025299 2653 bp mRNA linear HUM 11-SEP-2007 DEFINITION Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone IMAGE:4890919), partial cds. ACCESSION BC025299 VERSION BC025299.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2653) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2653) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: i Column: 13 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504622. FEATURES Location/Qualifiers source 1..2653 /db_xref="H-InvDB:HIT000091024" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4890919" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>2653 /gene="IGHMBP2" /gene_synonym="CATF1" /gene_synonym="HCSA" /gene_synonym="HMN6" /gene_synonym="SMARD1" /gene_synonym="SMUBP2" /db_xref="GeneID:3508" /db_xref="HGNC:HGNC:5542" /db_xref="IMGT/GENE-DB:IGHMBP2" /db_xref="MIM:600502" CDS 48..>2653 /gene="IGHMBP2" /gene_synonym="CATF1" /gene_synonym="HCSA" /gene_synonym="HMN6" /gene_synonym="SMARD1" /gene_synonym="SMUBP2" /codon_start=1 /product="IGHMBP2 protein" /protein_id="AAH25299.1" /db_xref="GeneID:3508" /db_xref="HGNC:HGNC:5542" /db_xref="IMGT/GENE-DB:IGHMBP2" /db_xref="MIM:600502" /translation="MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRG VCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLA TGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHS GPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVLFALSQKELAIIHGPPGT GKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQ QHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKERE EAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMR WASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQS KGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDG FQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLK TLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSSHAATKPQGPATSTRTGSQRQEG GQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGVESQDGVDHFRAMIVEFMASK KMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRAPRPRAALGPPAG TGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQAS GQQKLPEKKKKK" BASE COUNT 613 a 757 c 794 g 489 t ORIGIN 1 cgcagaagcg ggacgtcggc ttctaggggc ccaggccggc ggcggcgatg gcctcggcag 61 ctgtggagag cttcgtgacc aagcaactgg acctgctgga gcttgagaga gacgcggagg 121 tggaggagcg caggtcctgg caggagaaca tctctctgaa agagctccag agccgaggcg 181 tgtgtttgct gaagctgcag gtatccagcc agcgcactgg gctgtacgga cggctgctgg 241 tcacctttga gcccaggcga tacgggtccg cggcagctct tcccagtaac agctttactt 301 ctggtgatat cgtgggcctg tacgatgctg ctaatgaggg cagtcagctg gccactggga 361 tcttgacccg ggtcacccag aagtcggtca cggtggcctt tgatgagtcc cacgatttcc 421 agttgagctt ggaccgagag aattcctaca gactgttaaa acttgccaat gatgtcactt 481 acaggcgact gaaaaaagcc ctgattgctc taaagaagta tcattctggc ccagcctcct 541 cactcataga agtgctcttt ggcagatctg ctcccagtcc tgccagtgaa atacacccgc 601 tgacattctt caacacctgc ctggacacct cccagaaaga agcggtttta tttgcgctgt 661 ctcagaaaga acttgccatc atccatggac ctcctggcac tgggaaaacc acgactgtgg 721 ttgagatcat tcttcaagct gtgaaacaag gcttaaaggt tctgtgctgc gccccctcca 781 acatcgccgt ggacaatctg gtggagcgcc tggctctgtg taagcagcgg attctgcgcc 841 tgggacaccc tgcccgcctc ctggagtcca ttcagcagca ctccctggat gcggttttag 901 cgcggagcga cagtgcccag attgttgcag atatcaggaa ggacatcgac caggtctttg 961 tgaaaaacaa aaagacccag gataagagag agaaaagtaa ttttcgaaat gaaattaagc 1021 tgttaagaaa agaactgaag gagagggaag aagcagctat gctcgagagc ctcacttcgg 1081 caaacgtggt ccttgcaaca aacacaggtg cgtctgccga tggccccctg aagttgctgc 1141 ccgagagcta cttcgacgtg gtggtcattg acgagtgtgc ccaggccctc gaggcgagct 1201 gctggatccc cctgctgaag gccagaaagt gcatcctggc gggcgatcac aagcagctgc 1261 cccccaccac agtctctcac aaggctgcgc tggcaggact gtcactcagc ctgatggaac 1321 gcctggctga ggagtacggc gcgagggtgg tgcggacact gacggtgcag taccgcatgc 1381 accaggctat catgcgctgg gcctcagaca ccatgtacct tgggcagctc acagcccact 1441 cttccgtggc aaggcacctc ctgagggacc tcccaggtgt ggctgccaca gaagagacgg 1501 gtgtgcccct gctcttggtg gacaccgccg gctgcgggct gtttgagctg gaggaggagg 1561 acgaacagtc gaaagggaac cctggcgaag tccgcctcgt cagtttgcac atccaggctc 1621 tggtggacgc tggtgttcca gcccgtgaca ttgctgtggt ctcgccatac aacctccagg 1681 tggacctgct cagacagagc cttgtgcaca ggcaccctga gcttgaaatc aagtctgtcg 1741 atggcttcca aggccgagag aaggaggccg tgatactgtc cttcgtcaga tccaacagga 1801 aaggtgaagt tggttttctt gctgaggacc ggaggatcaa cgtggctgtc acccgtgccc 1861 gacgccacgt ggcggtcatc tgtgactccc gtactgtcaa caaccatgca tttttgaaga 1921 ccctggtgga gtatttcaca cagcatgggg aagtacgcac ggcctttgag tatcttgacg 1981 atattgtccc agaaaactat tcccatgaga actcccaggg ttccagccac gctgccacca 2041 agccccaggg acctgctacg tccaccagga ccggaagcca gcggcaggag ggaggccagg 2101 aggctgcagc acctgccaga cagggccgga agaagccggc tgggaagtct ctggcctctg 2161 aagctccatc tcagcccagc ctcaacggag gcagcccaga gggagtggag agccaagatg 2221 gcgtggacca cttccgggcc atgatagtgg agttcatggc cagcaagaag atgcagttgg 2281 agtttcctcc ttccctcaat tcccacgaca ggctgcgggt ccaccaaata gccgaggagc 2341 acgggctgag gcacgacagt tccggggaag ggaagaggag gttcatcact gtgagcaaga 2401 gggccccgcg accccgagca gccctgggac ccccagcagg gaccggtggc ccagcccctc 2461 tccagccagt gccccctacc cctgcgcaga cagagcagcc tcccagggag cagcgtggcc 2521 cagaccagcc tgatctgagg acgctgcacc tggagagact gcagagggtc aggagcgcgc 2581 aggggcagcc cgccagcaag gagcagcagg cctcagggca gcagaaactt ccagaaaaaa 2641 aaaaaaaaaa aaa //