LOCUS BC025275 2026 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATPase, H+ transporting, lysosomal 50/57kDa, V1
subunit H, mRNA (cDNA clone MGC:39180 IMAGE:4646010), complete cds.
ACCESSION BC025275
VERSION BC025275.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2026)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2026)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: f Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47717099.
FEATURES Location/Qualifiers
source 1..2026
/db_xref="H-InvDB:HIT000039876"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39180 IMAGE:4646010"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2026
/gene="ATP6V1H"
/gene_synonym="CGI-11"
/gene_synonym="MSTP042"
/gene_synonym="SFD"
/gene_synonym="SFDalpha"
/gene_synonym="SFDbeta"
/gene_synonym="VMA13"
/db_xref="GeneID:51606"
/db_xref="HGNC:HGNC:18303"
/db_xref="MIM:608861"
CDS 237..1688
/gene="ATP6V1H"
/gene_synonym="CGI-11"
/gene_synonym="MSTP042"
/gene_synonym="SFD"
/gene_synonym="SFDalpha"
/gene_synonym="SFDbeta"
/gene_synonym="VMA13"
/codon_start=1
/product="ATPase, H+ transporting, lysosomal 50/57kDa, V1
subunit H"
/protein_id="AAH25275.1"
/db_xref="GeneID:51606"
/db_xref="HGNC:HGNC:18303"
/db_xref="MIM:608861"
/translation="MTKMDIRGAVDAAVPTNIIAAKAAEVRANKVNWQSYLQGQMISA
EDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLMTHICKEQTVQYILTMVDDMLQ
ENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTVHMAARIIAKLAAWGKELMEGSD
LNYYFNWIKTQLSSQKLRGSGVAVETGTVSSSDSSQYVQCVAGCLQLMLRVNEYRFAW
VEADGVNCIMGVLSNKCGFQLQYQMIFSIWLLAFSPQMCEHLRRYNIIPVLSDILQES
VKEKVTRIILAAFRNFLEKSTERETRQEYALAMIQCKVLKQLENLEQQKYDDEDISED
IKFLLEKLGESVQDLSSFDEYSSELKSGRLEWSPVHKSEKFWRENAVRLNEKNYELLK
ILTKLLEVSDDPQVLAVAAHDVGEYVRHYPRGKRVIEQLGGKQLVMNHMHHEDQQVRY
NALLAVQKLMVHNWEYLGKQLQSEQPQTAAARS"
BASE COUNT 597 a 418 c 477 g 534 t
ORIGIN
1 gcggccctca acgtctcctt ggtgcgggac ccgcttcact ttcggctccc ggagtctccc
61 tccactgctc agacctctgg acctgacagg agacgcctac ttggctctga cgcggcgccc
121 cagcccggct gtgtccccgg cgccccggac caccctccct gccggctttg ggtgcgttgt
181 ggggtcccga ggattcgcga gatttgttga aagacattca agattacgaa gtttagatga
241 ccaaaatgga tatccgaggt gctgtggatg ctgctgtccc caccaatatt attgctgcca
301 aggctgcaga agttcgtgca aacaaagtca actggcaatc ctatcttcag ggacagatga
361 tttctgctga agattgtgag tttattcaga ggtttgaaat gaaacgaagc cctgaagaga
421 agcaagagat gcttcaaact gaaggcagcc agtgtgctaa aacatttata aatctgatga
481 ctcatatctg caaagaacag accgttcagt atatactaac tatggtggat gatatgctgc
541 aggaaaatca tcagcgtgtt agcattttct ttgactatgc aagatgtagc aagaacactg
601 cgtggcccta ctttctgcca atgttgaatc gccaggatcc cttcactgtt catatggcag
661 caagaattat tgccaagtta gcagcttggg gaaaagaact gatggaaggc agtgacttaa
721 attactattt caattggata aaaactcagc tgagttcaca gaaactgcgt ggtagcggtg
781 ttgctgttga aacaggaaca gtctcttcaa gtgatagttc gcagtatgtg cagtgcgtgg
841 ccgggtgttt gcagctgatg ctccgggtca atgagtaccg ctttgcttgg gtggaagcag
901 atggggtaaa ttgcataatg ggagtgttga gtaacaagtg tggctttcag ctccagtatc
961 aaatgatttt ttcaatatgg ctcctggcat tcagtcctca aatgtgtgaa cacctgcggc
1021 gctataatat cattccagtt ctgtctgata tccttcagga gtctgtcaaa gagaaagtaa
1081 caagaatcat tcttgcagca tttcgtaact ttttagaaaa atcaactgaa agagaaactc
1141 gccaagaata tgccctggct atgattcagt gcaaagttct gaaacagttg gagaacttgg
1201 aacagcagaa gtacgatgat gaagatatca gcgaagatat caaatttctt ttggaaaaac
1261 ttggagagag tgtccaggac cttagttcat ttgatgaata cagttcagaa cttaaatctg
1321 gaaggttgga atggagtcct gtgcacaaat ctgagaaatt ttggagagag aatgctgtga
1381 ggttaaatga gaagaattat gaactcttga aaatcttgac aaaacttttg gaagtgtcag
1441 atgatcccca agtcttagct gttgctgctc acgatgttgg agaatatgtg cggcattatc
1501 cacgaggcaa acgggtcatc gagcagctcg gtgggaagca gctggtcatg aaccacatgc
1561 atcatgaaga ccagcaggtc cgctataatg ctctgctggc cgtgcagaag ctcatggtgc
1621 acaactggga ataccttggc aagcagctcc agtccgagca gccccagacc gctgccgccc
1681 gaagctaagc ctgcctctgg ccttcccctc cgcctcaatg cagaaccagt agtgggagca
1741 ctgtgtttag agttaagagt gaacactgtt tgattttact tggaatttcc tctgttatat
1801 agcttttccc aatgctaatt tccaaacaac aacaacaaaa taacatgttt gcctgttaag
1861 ttgtataaaa gtaggtgatt ctgtatttaa agaaaatatt actgttacat atactgcttg
1921 caatttctgt atttattgtt ctctggaaat aaatatagtt attaaaggat tctcactcca
1981 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//