LOCUS BC025273 1598 bp mRNA linear HUM 09-JUN-2008 DEFINITION Homo sapiens glycerophosphodiester phosphodiesterase 1, mRNA (cDNA clone MGC:39178 IMAGE:5427491), complete cds. ACCESSION BC025273 VERSION BC025273.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1598) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1598) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: n Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 39753954. FEATURES Location/Qualifiers source 1..1598 /db_xref="H-InvDB:HIT000039875" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39178 IMAGE:5427491" /tissue_type="Brain, astrocytoma, grade IV" /clone_lib="NIH_MGC_98" /lab_host="DH10B" /note="Vector: pOTB7" gene 1..1598 /gene="GDE1" /gene_synonym="363E6.2" /gene_synonym="MIR16" /db_xref="GeneID:51573" /db_xref="HGNC:HGNC:29644" /db_xref="MIM:605943" CDS 116..1111 /gene="GDE1" /gene_synonym="363E6.2" /gene_synonym="MIR16" /codon_start=1 /product="glycerophosphodiester phosphodiesterase 1" /protein_id="AAH25273.1" /db_xref="GeneID:51573" /db_xref="HGNC:HGNC:29644" /db_xref="MIM:605943" /translation="MWLWEDQGGLLGPFSFLLLVLLLVTRSPVNACLLTGSLFVLLRV FSFEPVPSCRALQVLKPRDRISAIAHRGGSHDAPENTLAAIRQAAKNGATGVELDIEF TSDGIPVLMHDNTVDRTTDGTGRLCDLTFEQIRKLNPAANHRLRNDFPDEKIPTLREA VAECLNHNLTIFFDVKGHAHKATEALKKMYMEFPQLYNNSVVCSFLPEVIYKMRQTDR DVITALTHRPWSLSHTGDGKPRYDTFWKHFIFVMMDILLDWSMHNILWYLCGISAFLM QKDFVSPAYLKKWSAKGIQVVGWTVNTFDEKSYYESHLGSSYITDSMVEDCEPHF" BASE COUNT 425 a 392 c 387 g 394 t ORIGIN 1 ctcagagggt tcctgctgct gccggtgcct tggaccctcc ccctcgcttc tcgttctact 61 gccccaggag cccggcgggt ccgggactcc cgtccgtgcc ggtgcgggcg ccggcatgtg 121 gctgtgggag gaccagggcg gcctcctggg ccctttctcc ttcctgctgc tagtgctgct 181 gctggtgacg cggagcccgg tcaatgcctg cctcctcacc ggcagcctct tcgttctact 241 gcgcgtcttc agctttgagc cggtgccctc ttgcagggcc ctgcaggtgc tcaagccccg 301 ggaccgcatt tctgccatcg cccaccgtgg cggcagccac gacgcgcccg agaacacgct 361 ggcggccatt cggcaggcag ctaagaatgg agcaacaggc gtggagttgg acattgagtt 421 tacttctgac gggattcctg tcttaatgca cgataacaca gtagatagga cgactgatgg 481 gactgggcga ttgtgtgatt tgacatttga acaaattagg aagctgaatc ctgcagcaaa 541 ccacagactc aggaatgatt tccctgatga aaagatccct accctaaggg aagctgttgc 601 agagtgccta aaccataacc tcacaatctt ctttgatgtc aaaggccatg cacacaaggc 661 tactgaggct ctaaagaaaa tgtatatgga atttcctcaa ctgtataata atagtgtggt 721 ctgttctttc ttgccagaag ttatctacaa gatgagacaa acagatcggg atgtaataac 781 agcattaact cacagacctt ggagcctaag ccatacagga gatgggaaac cacgctatga 841 tactttctgg aaacatttta tatttgttat gatggacatt ttgctcgatt ggagcatgca 901 taatatcttg tggtacctgt gtggaatttc agctttcctc atgcaaaagg attttgtatc 961 cccggcctac ttgaagaagt ggtcagctaa aggaatccag gttgttggtt ggactgttaa 1021 tacctttgat gaaaagagtt actacgaatc ccatcttggt tccagctata tcactgacag 1081 catggtagaa gactgcgaac ctcacttcta gactttcacg gtgggacgaa acgggttcag 1141 aaactgccag gggcctcata cagggatatc aaaataccct ttgtgctagc ccaggccctg 1201 gggaatcagg tgactcacac aaatgcaata gttggtcact gcatttttac ctgaaccaaa 1261 gctaaacccg gtgttgccac catgcaccat ggcatgccag agttcaacac tgttgctctt 1321 gaaaatctgg gtctgaaaaa acgcacaaga gcccctgccc tgccctagct gaggcacaca 1381 gggagaccca gtgaggataa gcacagattg aattgtacaa tttgcagatg cagatgtaaa 1441 tgcatgggac atgcatgata actcagagtt gacattttaa aacttgccac acttatttca 1501 aatatttgta ctcagctatg ttaacatgta ctgtagacat caaacttgtg gccatactaa 1561 taaaattatt aaaaggaaaa aaaaaaaaaa aaaaaaaa //