LOCUS BC025249 2948 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger and BTB domain containing 3, mRNA (cDNA
clone MGC:39121 IMAGE:5444179), complete cds.
ACCESSION BC025249
VERSION BC025249.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2948)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2948)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: p Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21314717.
FEATURES Location/Qualifiers
source 1..2948
/db_xref="H-InvDB:HIT000039861"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39121 IMAGE:5444179"
/tissue_type="Skin, melanoma, amelanotic"
/clone_lib="NIH_MGC_41"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2948
/gene="ZBTB3"
/gene_synonym="FLJ23392"
/db_xref="GeneID:79842"
/db_xref="HGNC:HGNC:22918"
CDS 81..1805
/gene="ZBTB3"
/gene_synonym="FLJ23392"
/codon_start=1
/product="zinc finger and BTB domain containing 3"
/protein_id="AAH25249.1"
/db_xref="GeneID:79842"
/db_xref="HGNC:HGNC:22918"
/translation="MLREFSKWGVEASPGKAWERKRSLLRGAVGRYRGATGGDLFWAP
FPSWGTMEFPEHSQQLLQSLREQRSQGFLCDCTVMVGSTQFLAHRAVLASCSPFFQLF
YKERELDKRDLVCIHNEIVTAPAFGLLLDFMYAGQLTLRGDTPVEDVLAAASYLHMND
IVKVCKRRLQARALAEADSTKKEEETNSQLPSLEFLSSTSRGTQPSLASAETSGHWGK
GEWKGSAAPSPTVRPPDEPPMSSGADTTQPGMEVDAPHLRAPHPPVADVSLASPSSST
ETIPTNYFSSGISAVSLEPLPSLDVGPESLRVVEPKDPGGPLQGFYPPASAPTSAPAP
VSAPVPSQAPAPAEAELVQVKVEAIVISDEETDVSDEQPQGPERAFPSGGAVYGAQPS
QPEAFEDPGAAGLEEVGPSDHFLPTDPHLPYHLLPGAGQYHRGLVTSPLPAPASLHEP
LYLSSEYEAAPGSFGVFTEDVPTCKTCGKTFSCSYTLRRHATVHTRERPYECRYCLRS
YTQSGDLYRHIRKAHNEDLAKRSKPDPEVGPLLGVQPLPGSPTADRQSSSGGGPPKDF
VLAPKTNI"
BASE COUNT 623 a 837 c 768 g 720 t
ORIGIN
1 gctcggtggt gggtgaggta tcagctttct ccgctagttc ccaccctggt agtccttagc
61 ccctggaatg cgtgagggag atgcttaggg agttctcgaa gtggggcgta gaggcatcgc
121 ctggcaaggc ctgggagcga aaaagatctc tacttcgtgg agccgttgga cgctaccggg
181 gagccactgg tggggacctt ttttgggccc cctttccttc gtggggtact atggagttcc
241 cagaacacag tcagcagctg ctgcagagcc tccgggagca gcggtcccag ggtttccttt
301 gtgactgcac cgtgatggtg ggtagtaccc agttcttggc ccatcgggct gtgctggcct
361 cctgcagccc attcttccag cttttctaca aggagcggga attggacaag agggatctgg
421 tgtgtattca caatgaaatt gtcacagccc cagcctttgg gctgcttctg gactttatgt
481 atgctggcca gctgaccctg agaggggata cccctgtgga ggatgtgctg gcagctgcca
541 gctacttgca catgaatgac atcgtcaagg tgtgtaagcg gcggcttcaa gcccgggccc
601 tggcagaggc agacagtacc aagaaggagg aggaaaccaa ctcacagctt cctagtttgg
661 agtttttgtc tagtacttcc cgtggcaccc aaccttcgtt ggcatctgct gagacatcag
721 gccactgggg caaaggggaa tggaaaggct ctgctgctcc ctcacctact gtccgtcctc
781 cagatgagcc accaatgtct agtggggctg acactacaca gcctggcatg gaggttgacg
841 caccacatct gcgggcacct catccaccag tggctgatgt ctctcttgcc agccctagta
901 gctccactga gaccattcct acaaactact tctcttctgg catctcagca gtttcattgg
961 agccactgcc atctcttgat gtgggtcctg agagtctgag ggtggtggaa ccaaaggatc
1021 ctggaggacc actgcaaggc ttctatcccc cagcctcagc cccaacgtca gccccagccc
1081 ctgtctcagc tccagttcca tcccaggctc cagccccagc tgaagctgag ctggtccagg
1141 tgaaagttga agctattgtg atctctgatg aagagactga tgtgtcagat gaacagcctc
1201 agggtcctga gagagctttc ccatctggag gagcagtgta tggggcacag ccctcccagc
1261 cagaggcttt tgaagaccca ggggcagcag gactggagga ggtggggcca agtgaccact
1321 tcctgccaac agaccctcat ctaccctacc atctgctgcc aggtgcaggg cagtatcatc
1381 gaggactggt gacctcacct ctgcctgcac ccgcatccct gcatgagcca ctttacctgt
1441 cttctgagta cgaagcagct ccaggaagct ttggggtttt tactgaggat gttcccacct
1501 gcaagacatg tgggaagacc ttctcatgct cttacacact acggcgacat gccacggtgc
1561 acacacgtga gcgaccctat gagtgccgct actgcctgcg gagctacacg cagtcagggg
1621 acctctaccg ccacatccgc aaggctcaca atgaggacct ggccaaacgc agcaaaccag
1681 atccagaagt gggacccctt ctaggggtgc agcctctccc tggctcccca acagcagaca
1741 gacagagcag cagtggtgga gggccaccta aagattttgt attggcccca aaaactaaca
1801 tctaagggag catgagctga tgctaggctg ctcttaccat ccttagatgg cagctcagaa
1861 ggttggtggc accttatcac ccctgctggg tgacaagaat aaaggctctg cccaggctga
1921 aagttcctac cctttttttt tttaatcttt tatttttttg agacagagtc tcactctgtc
1981 acccagactg gagtgcagtg gcgcgatctc ggctcactgc aagctcagcc tccccgattc
2041 acgccattct cctgcctcag cctcccgagt agctgggact acaggcgcct atcaccatgc
2101 ctggctaatt ttttttgatt tttagtagag acagggtttc accgtgttag ccaggatggt
2161 ctcgatcttc tgacagatct gacctcgtga tccgcccatc tccacctccc gcagtgctgg
2221 gattacaggc atgagccacc gcgcccagct gccttttttt tttttgagtc ttgctctgtc
2281 actgaggctg gagtgcagtg gcgcaatttc agctcactgc aacctctgcc tcccaggttc
2341 aagcgattcc tttttttttt tttttttttg agacagagtc tcactctgtc ccccaggctg
2401 gagtgcagtg gcgcgatctt ggcccaccac gcccgcctaa ttttttgtat tttttagtag
2461 agacggggtt tcaccgtgtt agtcaggatg gtctcgatct cctgacctcg tgatccaccc
2521 gcctcagcct cccaaagtgc tgggattaca ggcttgagcc accgtgcctg gcctcaagcg
2581 attctcttaa ctcagcctct tgagtagctg ggattacagg aacgcgccac cacgcccagc
2641 taattcctgt atttttagta gagacagggt ttcaccatgt tggccaggct ggtctcaaat
2701 tcctgacccc aggtgatctg cccaccttgg ccttaaaaag tgctgggatt aaaggcgtga
2761 gccaccatgc ccagcctcct acccttttct ttgcccagcc agataagcag gactttatgg
2821 ggcaaagcct atgtcagctc tctccaaggg cactgggaat tttcctgagg tgtaatcgct
2881 tctcactgta tgttctggaa cataaagcta gcaatgaagg tatttctttg aaaaaaaaaa
2941 aaaaaaaa
//