LOCUS BC025241 2180 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens zinc finger protein 394, mRNA (cDNA clone MGC:39096
IMAGE:4641268), complete cds.
ACCESSION BC025241
VERSION BC025241.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2180)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2180)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: f Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31982908.
FEATURES Location/Qualifiers
source 1..2180
/db_xref="H-InvDB:HIT000039856"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39096 IMAGE:4641268"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2180
/gene="ZNF394"
/gene_synonym="FLJ12298"
/db_xref="GeneID:84124"
/db_xref="HGNC:HGNC:18832"
CDS 189..1874
/gene="ZNF394"
/gene_synonym="FLJ12298"
/codon_start=1
/product="zinc finger protein 394"
/protein_id="AAH25241.1"
/db_xref="GeneID:84124"
/db_xref="HGNC:HGNC:18832"
/translation="MNSSLTAQRRGSDAELGPWVMAARSKDAAPSQRDGLLPVKVEED
SPGSWEPNYPAASPDPETSRLHFRQLRYQEVAGPEEALSRLRELCRRWLRPELLSKEQ
ILELLVLEQFLTILPEELQAWVREHCPESGEEAVAVVRALQRALDGTSSQGMVTFEDT
AVSLTWEEWERLDPARRDFCRESAQKDSGSTVPPSLESRVENKELIPMQQILEEAEPQ
GQLQEAFQGKRPLFSKCGSTHEDRVEKQSGDPLPLKLENSPEAEGLNSISDVNKNGSI
EGEDSKNNELQNSARCSNLVLCQHIPKAERPTDSEEHGNKCKQSFHMVTWHVLKPHKS
DSGDSFHHSSLFETQRQLHEERPYKCGNCGKSFKQRSDLFRHQRIHTGEKPYGCQECG
KSFSQSAALTKHQRTHTGEKPYTCLKCGERFRQNSHLNRHQSTHSRDKHFKCEECGET
CHISNLFRHQRLHKGERPYKCEECEKSFKQRSDLFKHHRIHTGEKPYGCSVCGKRFNQ
SATLIKHQRIHTGEKPYKCLECGERFRQSTHLIRHQRIHQNKVLSAGRGGSRL"
BASE COUNT 621 a 514 c 628 g 417 t
ORIGIN
1 gttttcggtt gtttgaccga gagagttgta ggcgcaaagc tgaggaaagg agagtgtgga
61 gaggggcctg gtgtggtggg gcccggtgtt tgggaccgga gggtgttgac ggctgatgag
121 ttccttgggt ttgctctttc ttcacctgaa aagaagactc caggaagggc agcacatgcc
181 ggagaaagat gaattccagc ttgaccgccc agaggcgcgg cagtgacgcc gagttgggac
241 cctgggtgat ggctgcgagg tccaaggacg cggcgccgtc ccaacgcgac ggacttttgc
301 ccgtgaaagt ggaggaagac tcacccggaa gttgggagcc caactatccc gcggcttcgc
361 cggaccccga aacttctcga ctgcacttta ggcagctgcg ttaccaggag gtggctggac
421 cggaagaggc gctgagccgg ctccgagaac tctgtcgtcg gtggctgaga cccgagctgc
481 tctccaagga gcagatcctg gagctgctgg tgctggagca gttcctcacc atcctgcccg
541 aggagcttca agcctgggtg cgagagcact gcccagagag cggggaggag gcggtggccg
601 tggtgcgggc tctgcagcga gcgctcgatg gaacctcatc ccaggggatg gtgactttcg
661 aggacacggc tgtgtctcta acctgggagg agtgggagcg cctggaccca gcacggaggg
721 acttctgcag agagagtgcg cagaaggatt ccgggagcac agttccgccg agtttggaaa
781 gcagagtgga gaacaaagag ttgattccaa tgcaacaaat tttagaagaa gcggagccac
841 aggggcaact acaagaagcg ttccagggga agcgccccct gttttctaag tgtggcagta
901 cccatgagga cagggtggaa aagcagtccg gagacccctt gcccctgaaa cttgaaaatt
961 ctcctgaagc agaaggactc aacagcatct cagatgtcaa taagaatggt tccatagaag
1021 gggaagactc taaaaataat gaattgcaga acagtgccag gtgttccaac cttgttctat
1081 gtcagcacat cccgaaagca gagaggccca ctgacagtga ggaacacggg aacaagtgca
1141 agcaaagttt ccacatggtg acgtggcacg tgctgaaacc tcacaagtct gacagtggag
1201 acagtttcca tcattccagc ctttttgaga cccagaggca gctccatgaa gaaagacctt
1261 ataaatgtgg taactgtggg aagagtttca aacaacgctc tgacctcttt agacaccaga
1321 gaatccacac aggtgagaaa ccctatggct gccaagaatg tgggaaaagc ttcagccaga
1381 gtgctgccct gaccaagcac cagaggacac acacaggcga gaagccgtac acctgtctga
1441 aatgtgggga gcgcttcagg cagaattcac acctaaatcg tcatcaaagt acccacagta
1501 gagacaaaca ttttaaatgt gaggaatgcg gggaaacctg tcatatttcc aaccttttta
1561 gacatcagag actacataaa ggggaaagac cctataagtg tgaagaatgc gagaagagct
1621 tcaaacagcg ctctgacctc tttaaacacc acagaatcca cactggggag aagccctatg
1681 gatgttccgt ctgtgggaaa cgcttcaatc agagtgcaac cctcattaaa caccagagaa
1741 ttcacactgg ggaaaagcct tacaaatgtc ttgaatgtgg ggaaagattt agacaaagta
1801 cacaccttat ccgacaccaa agaattcatc aaaataaagt gctgtcggct gggcgtggtg
1861 gctcacgcct ataatcccag cactttggga ggccaaggca ggcagatcat ttgagatcag
1921 gagtttgaaa ccagcctggc caacatggta aaatcctgtc tctactaaaa atacaaaaat
1981 gagccgggca tggtggtgca tgcctgtaag cccagctatt cgggaggctg aggtaggaga
2041 atcacttgaa cccaggaggc ggaagttgca gtgagctgag atcatgccac tgcactccag
2101 cctgggcaac agagcgagac tccatctcaa aaaagaaata aagtgctgtc attttgaaaa
2161 aaaaaaaaaa aaaaaaaaaa
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