LOCUS BC025105 1423 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus V-set and immunoglobulin domain containing 4, mRNA (cDNA clone MGC:36211 IMAGE:4162875), complete cds. ACCESSION BC025105 VERSION BC025105.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1423) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1423) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Jeffrey E. Green, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 61 Row: i Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31343017. FEATURES Location/Qualifiers source 1..1423 /organism="Mus musculus" /mol_type="mRNA" /strain="FVB/N" /db_xref="taxon:10090" /clone="MGC:36211 IMAGE:4162875" /tissue_type="Liver, normal. 5 month old male mouse." /clone_lib="NCI_CGAP_Li9" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1423 /gene="Vsig4" /gene_synonym="A530061A11" /gene_synonym="MGC36211" /gene_synonym="Z39IG" /db_xref="GeneID:278180" /db_xref="MGI:MGI:2679720" CDS 47..889 /gene="Vsig4" /gene_synonym="A530061A11" /gene_synonym="MGC36211" /gene_synonym="Z39IG" /codon_start=1 /product="V-set and immunoglobulin domain containing 4" /protein_id="AAH25105.1" /db_xref="GeneID:278180" /db_xref="MGI:MGI:2679720" /translation="MEISSGLLFLGHLIVLTYGHPTLKTPESVTGTWKGDVKIQCIYD PLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSHKVPGDVSLQINT LQMDDRNHYTCEVTWQTPDGNQVIRDKIIELRVRKYNPPRINTEAPTTLHSSLEATTI MSSTSDLTTNGTGKLEETIAGSGRNLPIFAIIFIISLCCIVAVTIPYILFRCRTFQQE YVYGVSRVFARKTSNSEETTRVTTIATDEPDSQALISDYSDDPCLSQEYQITIRSTMS IPAC" BASE COUNT 428 a 343 c 283 g 369 t ORIGIN 1 cagcagcaag aggatggaag gatgaataga agtagcttca aataggatgg agatctcatc 61 aggcttgctg ttcctgggcc acctaatagt gctcacctat ggccacccca ccctaaaaac 121 acctgagagt gtgacaggga cctggaaagg agatgtgaag attcagtgca tctatgatcc 181 cctgagaggc tacaggcaag ttttggtgaa atggctggta agacacggct ctgactccgt 241 caccatcttc ctacgtgact ccactggaga ccatatccag caggcaaagt acagaggccg 301 cctgaaagtg agccacaaag ttccaggaga tgtgtccctc caaataaata ccctgcagat 361 ggatgacagg aatcactata catgtgaggt cacctggcag actcctgatg gaaaccaagt 421 aataagagat aagatcattg agctccgtgt tcggaaatat aatccaccta gaatcaatac 481 tgaagcacct acaaccctgc actcctcttt ggaagcaaca actataatga gttcaacctc 541 tgacttgacc actaatggga ctggaaaact tgaggagacc attgctggtt cagggaggaa 601 cctgccaatc tttgccataa tcttcatcat ctccctttgc tgcatagtag ctgtcaccat 661 accttatatc ttgttccgct gcaggacatt ccaacaagag tatgtctatg gagtgagcag 721 ggtgtttgcc aggaagacaa gcaactctga agaaaccaca agggtgacta ccatcgcaac 781 tgatgaacca gattcccagg ctctgattag tgactactct gatgatcctt gcctcagcca 841 ggagtaccaa ataaccatca gatcaacaat gtctattcct gcctgctgaa cacagtttcc 901 agaaactaag aagttcttgc tactgaagaa aataacatct gctaaaatgc ccctactaag 961 tcaaggtcta ctggcgtaat tacctgttac ttatttacta cttgccttca acatagcttt 1021 ctccctggct tcctttcttc ttagacaacc taaagtatct atctagtctg ccaattctgg 1081 ggccattgag aaatcctggg tttggctaag aatatactac atgcacctca agaaatctag 1141 cttctgggct tcacccagaa caattttctt cctagggcct tcacaactct tctccaaaca 1201 gcagagaaat tccatagcag tagaggttct ttatcatgcc tccagacagc gtgagtctca 1261 gtcctacaaa ctcagacaag cacatgggtc taggattact cctctttctc tagggccaga 1321 tgacttttaa ttgatattac tattgctaca ttatgaatct aatgcacatg tattcttttg 1381 ttgttaataa atgtttaatc atgacatcaa aaaaaaaaaa aaa //