LOCUS BC025026 1196 bp mRNA linear HUM 20-DEC-2004 DEFINITION Homo sapiens SIN3 homolog B, transcription regulator (yeast), mRNA (cDNA clone IMAGE:3923074), partial cds. ACCESSION BC025026 VERSION BC025026.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1196) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1196) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (05-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 26 Row: d Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1196 /db_xref="H-InvDB:HIT000090996" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3923074" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_72" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene <1..1196 /gene="SIN3B" /gene_synonym="KIAA0700" /db_xref="GeneID:23309" /db_xref="MIM:607777" CDS <1..1060 /gene="SIN3B" /gene_synonym="KIAA0700" /codon_start=2 /product="SIN3B protein" /protein_id="AAH25026.1" /db_xref="GeneID:23309" /db_xref="MIM:607777" /translation="AHAGGGSGGSGAGGPAGRGLSGARWGRSGSAGHEKLPVHVEDAL TYLDQVKIRFGSDPATYNGFLEIMKEFKSQSIDTPGVIRRVSQLFHEHPDLIVGFNAF LPLGYRIDIPKNGKLNIQSPLTSQENSHNHGDGAEDFKQQVPYKEDKPQVPLESDSVE FNNAISYVNKIKTRFLDHPEIYRSFLEILHTYQKEQLNTRGRPFRGMSEEEVFTEVAN LFRGQEDLLSEFGQFLPEAKRSLFTGNGPCEMHSVQKNEHDKTPEHSRKRSRPSLLRP VSAPAKKKMKLRGTKDLSIAAVGKYGTLQEFSFFDKVRRVLKSQEVYENFLRCIALFN QELVSGSELLQLVSPFLG" BASE COUNT 285 a 340 c 330 g 241 t ORIGIN 1 ggcgcacgct ggcggtggca gcggtggcag cggtgccggc ggccccgcgg gccgggggct 61 gagcggcgcc cgctggggtc gctcgggctc cgcaggccac gagaagctgc cggtgcacgt 121 agaagacgcc ctcacctatc tggaccaggt gaagatccgc tttggcagcg accctgccac 181 ctacaacggc ttcctggaga tcatgaagga gttcaaaagc cagagcatcg atactcctgg 241 agtcatcaga cgtgtctcgc agctcttcca cgagcaccct gacctcattg ttggattcaa 301 cgcttttctt cccctcggat atagaataga cattcccaag aatggcaagt taaacataca 361 gtcgcctctg acaagccagg agaattcgca caaccacggg gacggtgcag aggacttcaa 421 gcagcaggtg ccgtataaag aggacaaacc ccaggtgccc ctggagtccg attccgtgga 481 attcaacaac gccatcagct atgtgaataa gattaaaacc cgcttcctag accacccaga 541 aatctacagg tcattcctgg agatcctgca cacgtaccag aaggagcagc tgaacacgag 601 gggccggcca ttccgaggca tgtctgaaga ggaggtgttc accgaggtgg ccaacctctt 661 ccggggccag gaggacctgc tctcagagtt tggacagttc ctgcccgaag ccaagcggtc 721 tctgttcaca ggaaacgggc cgtgcgagat gcacagcgtg cagaagaacg agcacgacaa 781 gaccccggag cacagcagga agcgctcccg gccctcgctc ctccgccccg tgtctgcacc 841 cgccaagaaa aaaatgaaac ttcgtggtac caaagacctg tccatcgctg cagtggggaa 901 gtacgggact ctgcaggaat tttctttctt tgacaaggtc cgccgggtgc tgaagagcca 961 ggaggtgtat gaaaacttcc tccgctgcat cgcactcttc aaccaggagc tggtgtctgg 1021 ctctgagctc ctgcagctcg tcagcccatt tctggggtga gcagctgact tcccagggct 1081 ccctaggggg gttctgttcc tgtcaactcc atctacttgg tttttagtta ctgtttttga 1141 gcaatgattg tgcttttcta aaatcctgtt tattaattga aaaaaaaaaa aaaaaa //