LOCUS BC024777 1456 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens small nuclear ribonucleoprotein polypeptide N, mRNA (cDNA clone MGC:29886 IMAGE:3907606), complete cds. ACCESSION BC024777 VERSION BC024777.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1456) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1456) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 42 Row: b Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 29540556. FEATURES Location/Qualifiers source 1..1456 /db_xref="H-InvDB:HIT000050889" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29886 IMAGE:3907606" /tissue_type="Uterus, leiomyosarcoma" /clone_lib="NIH_MGC_71" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1456 /gene="SNRPN" /gene_synonym="HCERN3" /gene_synonym="RT-LI" /gene_synonym="SM-D" /gene_synonym="SMN" /gene_synonym="SNRNP-N" /gene_synonym="SNURF-SNRPN" /db_xref="GeneID:6638" /db_xref="HGNC:HGNC:11164" /db_xref="MIM:182279" CDS 589..1311 /gene="SNRPN" /gene_synonym="HCERN3" /gene_synonym="RT-LI" /gene_synonym="SM-D" /gene_synonym="SMN" /gene_synonym="SNRNP-N" /gene_synonym="SNURF-SNRPN" /codon_start=1 /product="SNRPN protein" /protein_id="AAH24777.1" /db_xref="GeneID:6638" /db_xref="HGNC:HGNC:11164" /db_xref="MIM:182279" /translation="MTVGKSSKMLQHIDYRMRCILQDGRIFIGTFKAFDKHMNLILCD CDEFRKIKPKNAKQPEREEKRVLGLVLLRGENLVSMTVEGPPPKDTGIARVPLAGAAG GPGVGRAAGRGVPAGVPIPQAPAGLAGPVRGVGGPSQQVMTPQGRGTVAAAAVAATAS IAGAPTQYPPGRGTPPPPVGRATPPPGIMAPPPGMRPPMGPPIGLPPARGTPIGMPPP GMRPPPPGIRGPPPPGMRPPRP" BASE COUNT 363 a 372 c 384 g 337 t ORIGIN 1 ctgctgtttc ggagtttcag ccgtaccctc tttagggtgc agtggtaagg agaggaagcc 61 ggccaaggag acagggtctg gctatgttgc ccaggttgga gtgcagtgat gcagttatag 121 ctccctgtaa cctcaaactc ctggatcaat ctagactcct gcctcagcct cccaagtgcc 181 tgttagtaca ggcttgaggg atcgcttaca cctgagacga actacagaac agcacgtacc 241 agaggtggaa gtccaagtca aacgcagaag gactgcctca ctgagcaacc aagagtgtca 301 gttgtacccg aggcgttctc agcagcagca agtacctgtg gtggatttcc aggctgaact 361 gaggcaggca ttcttagctg agacaccaag aggtggttaa agccatattg gagtagcgag 421 gaatctgatt ccaagcaaaa accaggctcc atctactctt tgaagcttct gcccagcttg 481 cattgtttct aggagaacct gcgtcatacc tttatctata gccttcccct aggtcttcag 541 aagcatcaag ttttaactgt ggacattgga tttggtggaa cagcaatcat gactgttggc 601 aagagtagca agatgctgca gcacattgac tatagaatga gatgtatcct gcaagatggc 661 cgaatcttca ttggcacctt taaggctttt gacaagcata tgaatttgat cctctgtgat 721 tgtgatgagt tcagaaagat caagccaaag aatgcgaagc aaccagagcg tgaagaaaag 781 cgggttttgg gtctggtgtt gctgcgtggg gagaacttgg tatccatgac tgtggagggg 841 ccacccccca aagatactgg cattgctcgg gtaccacttg ctggagctgc tggaggccct 901 ggggttggta gggcagctgg tagaggagta ccagctggtg tgccaattcc ccaggcccct 961 gctggattgg caggccctgt ccgaggagtt gggggaccat cccagcaggt aatgactcca 1021 cagggaagag gcactgtagc agctgctgct gttgctgcga ctgccagtat tgctggagcc 1081 ccaacacagt acccaccagg acggggcact ccgcccccac ccgtcggcag agcaacccca 1141 cctccaggca ttatggctcc tccacctggt atgagaccac ccatgggccc accaattggg 1201 cttccccctg ctcgagggac gccaataggc atgccgcctc cgggaatgag accccctcca 1261 ccaggcatta gaggtccacc tcccccagga atgcgtccac caagacctta gcatactgtt 1321 gatccatctc agtcactttt tcccctgcaa tgcgtcttgt gaaattgtgt agagtgtttg 1381 tgagcttttt gttccctcat tctgcattaa taatagctaa taataaatgc atagagcaat 1441 taaaaaaaaa aaaaaa //