LOCUS BC024327 929 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens CDC42 effector protein (Rho GTPase binding) 5, mRNA (cDNA clone MGC:21945 IMAGE:4390710), complete cds. ACCESSION BC024327 VERSION BC024327.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 929) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 929) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 27 Row: a Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 30089965. FEATURES Location/Qualifiers source 1..929 /db_xref="H-InvDB:HIT000039822" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:21945 IMAGE:4390710" /tissue_type="Bone, osteosarcoma" /clone_lib="NIH_MGC_86" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..929 /gene="CDC42EP5" /gene_synonym="Borg3" /gene_synonym="CEP5" /gene_synonym="MGC21945" /db_xref="GeneID:148170" /db_xref="HGNC:HGNC:17408" /db_xref="MIM:609171" CDS 340..786 /gene="CDC42EP5" /gene_synonym="Borg3" /gene_synonym="CEP5" /gene_synonym="MGC21945" /codon_start=1 /product="CDC42 effector protein (Rho GTPase binding) 5" /protein_id="AAH24327.1" /db_xref="GeneID:148170" /db_xref="HGNC:HGNC:17408" /db_xref="MIM:609171" /translation="MPVLKQLGPAQPKKRPDRGALSISAPLGDFRHTLHVGRGGDAFG DTSFLSRHGGGPPPQPRAPPAGAPRSPPPPAVPQSAAPSPADPLLSFHLDLGPSMLDA VLGVMDAARPEAAAAKPDAEPRPGTQPPQARCRPNADLELNDVIGL" BASE COUNT 187 a 333 c 288 g 121 t ORIGIN 1 cgcccagagg ggcctcagct tttccaccac tgctttctag tcctttaact cctagaggca 61 aacttttggg ggataagaaa gcctgggagg ggcctgtgcc aaaaccctct ctgcctgggg 121 actgggcggt gattccgctt ctgcctgggc tcctgccatg gcccccgaga ggggctgaca 181 ctttagctcc cggtgcaggt gagaacccgc ccggaggaag aaggaaggcg cgggccgggg 241 attaggagac ggaggcggac tcggagccag ggaaccaggg gtccgggcta gagctggagt 301 cgtgagcgcg cgcccgcccc gctctgggag gaccgcgaga tgcccgtgct gaagcagctg 361 ggccccgcgc agcccaagaa gcggcctgat cgcggcgccc tgtccatctc cgcgccgctc 421 ggcgacttcc ggcacacgct gcacgtgggg cgcggcggcg acgccttcgg ggacacctcg 481 ttcctgagcc gccacggcgg cgggccgccc ccccagcccc gggcgccccc cgcgggggcc 541 ccgcgctccc cgccgccgcc cgccgtcccg cagtccgcag cgccctcgcc tgccgacccg 601 ctgctgtcct tccacctgga tctggggccc tccatgctgg acgcggtgct gggcgtcatg 661 gacgcggcgc gcccggaggc ggctgccgcc aagcccgacg cggaaccccg ccccgggacg 721 cagccccccc aggcccgctg ccgccccaac gcggacctcg agctgaacga cgtcatcggc 781 ctctaggttc cctcattccc cgcgcccttc ccgcccggca ccccacttct gtatacataa 841 acggccaagg tgtgtgcccg gaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 901 aaagaaaaaa aaaaaaaaaa aaaaaaaaa //