LOCUS BC024307 2172 bp mRNA linear HTC 09-JUN-2008
DEFINITION Homo sapiens hypothetical LOC154822, mRNA (cDNA clone
IMAGE:4903629), with apparent retained intron.
ACCESSION BC024307
VERSION BC024307.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2172)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2172)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: k Column: 16
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..2172
/db_xref="H-InvDB:HIT000090938"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4903629"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 518 a 610 c 608 g 436 t
ORIGIN
1 gcagcccgga gacagcctcc ctggctggga atgaacgcag ggcagagctc ggctccgggc
61 ttcctcccca gggactcaca ggacgctgtg cagccccacc ccccaaccca ggcccggctt
121 tctgggactc acaagctatg gtcaggagcg agacgccgac catggggaaa aacagattct
181 gtctagaccc ggccgggagc tttcccgaga gggctccgag acggacggca gtcgatgcta
241 cttagggtgg acggaaggac ggcggggttt ggaagctggg cccagaagag tgggtttgcc
301 tgtgtcgttg tgggttctct gatggggaca cagaactgtg gggtcccggg cagtaactcg
361 agcccgcgga agacaggcat gtgtgggggc tgcggcacca ggctgggcag catctcagga
421 agcaagtgag tacctgtgct tggttccaag gcggccatga acttacctca ctgttcagga
481 aacagtagag gacggccacc accaggccct gcaatgagaa gagatggtca ggcaggaccc
541 gcgctcgggg gagggcggcc gcctccgcac acctacctgg aacgacccga ggcacagctc
601 aaacagtatc tggtatttgg aggagatgct gatgggaaac acggcaaaca ccatgtagtg
661 gacgccgaac agcgggataa gcaggagcgt ggacttggcc agcctcctgc acagaaggag
721 atgagccagc tcagctgctg gaccctcgga ccctctgcaa gcctggctgg gtccttctca
781 ggagggggca gctgggtgtg ggaggggctc cacacctcct ctccactgct ggagtccccg
841 cccaacaaga aaaaccactg tttctttacg tttatgtctg aggcccctgt gcatatctag
901 cactcagggc ctgggaacgt gcattccgga agtgtccgtt tctcccaaat tccctcacaa
961 ggacacacgc tgtgtcctgg ggttcatggc tggcaggggc aagattccct gtgagtgacc
1021 ccaaacctac acaggccccg cctgggagcc cggcccatcc tgaggcaggc atgggacaag
1081 aaggctggcc tccaccgctg ccacacgcag gtttaaatga tgagaaccga tcctgctccc
1141 ggacctgcag ctcgtaacag ctgggctccg tgggagccag gtccctcagt cagcggcaga
1201 ggacctgcct gattccctct attaacgcat ctgaagtttg ctggaaaaga ggcctatctg
1261 cggctgagct cttggcccct atccagggag gttttgctac ttctgtgacc agagttacac
1321 agaaaggacc tcgtgtggcc tcaagggtgt ctcggccttt tctgttgtcc tggaaaggga
1381 acagattttg tttccaaata aaagcatcca tctccaagtc caatttaaca aacactccca
1441 aagaaccaat gcaaaggtca gcatagaaac taaacaagat tcacaggaaa tccaagttca
1501 acctgaaagg caaccaagaa cgatcttatt cgggggtctc tgccacacag gcaccaccgg
1561 actcccctga gcagggacaa ggtcatgctg ccatgcgggg tctgacatgg aatcccatcc
1621 ctcgtgtggg caagcagaga cgggatactc cctggattta gacactacac agcagaatta
1681 gattctctgg tttaccagac tcttttgcaa tactctggtg ccaggcagca aatatccggc
1741 aaatatagac tgcattgatc ctcctgacct tagtgacatt attacttcca tgttacagat
1801 ggggaagctg aggcatggag tggcaaagtg acttccctca gggcactggc cggtatctgc
1861 acccagcttt ggggctgttg gccatgctcc tgtctaaccg cccctcccca aatccatccc
1921 tgttttctaa ggtgggagaa aagggaaatg caggccaggc accctcctag gctgggcggc
1981 agggttcctg ccatggtaca gctctgtgca cagccgccct tccacccccg gtcagtctga
2041 gcccgaggca ccttctgggc tgggccaacc acttccacac caagccagtg tttagtttat
2101 acttgaattt tggtttttac ctttttaaaa aaaaaataaa ttcttgatat aaaaaaaaaa
2161 aaaaaaaaaa aa
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