LOCUS BC024289 1630 bp mRNA linear HUM 27-OCT-2008
DEFINITION Homo sapiens interferon, alpha-inducible protein 6, mRNA (cDNA
clone IMAGE:5440834).
ACCESSION BC024289
VERSION BC024289.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1630)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1630)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. Mark Watson
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: o Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, GenomeScan gene prediction, Similarity but not identity
to protein.
FEATURES Location/Qualifiers
source 1..1630
/db_xref="H-InvDB:HIT000039808"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:5440834"
/tissue_type="Spleen"
/clone_lib="NIH_MGC_113"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 374 a 518 c 442 g 296 t
ORIGIN
1 ccttagccct ggattccaag gcctatccac ttggtgatca gcacggagca ccgaggattc
61 accatggaac tggggctccg ctgggttttc cttgttgcta ttttagaagg tgtccagtgt
121 gaggtgcagc tggtggagtc tgggggaggc ctggtcaagc ctggggggtc cctgagactc
181 tcctgtgcag cctctggatt caccttcagt agctatagca tgaactgggt ccgccaggct
241 ccagggaagg ggctggagtg ggtctcatcg atgagtagta gtagtagtta catatactac
301 gcagactcag tgaagggccg attcaccatc tccagagaca acgccaagaa ctcactgtat
361 ctgcaaatga acagcctgag agccgaggac acggctgtgt attactgtgc gagagatctc
421 cgccagctaa cttcctactg gtacttcgat ctctggggcc gtggcaccct ggtcactgtc
481 tcctcagcct ccaccaaggg cccatcggtc ttccccctgg caccctcctc caagagcacc
541 tctgggggca cagcggccct gggctgcctg gtcaaggact acttccccga accggtgacg
601 gtgtcgtgga actcaggcgc cctgaccagc ggcgtgcaca ccttcccggc tgtcctacag
661 tcctcaggac tctactccct cagcagcgtg gtgaccgtgc cctccagcag cttgggcacc
721 cagacctaca tctgcaacgt gaatcacaag cccagcaaca ccaaggtgga caagaaagtt
781 gagcccaaat cttgtgacaa aactcacaca tgcccaccgt gcccagcacc tgaactcctg
841 gggggaccgt cagtcttcct cttcccccca aaacccaagg acaccctcat gatctcccgg
901 acccctgagg tcacatgcgt ggtggtggac gtgagccacg aagaccctga ggtcaagttc
961 aactggtacg tggacggcgt ggaggtgcat aatgccaaga caaagccgcg ggaggagcag
1021 tacaacagca cgtaccgtgt ggtcagcgtc ctcaccgtcc tgcaccagga ctggctgaat
1081 ggcaaggagt acaagtgcaa ggtctccaac aaagccctcc cagcccccat cgagaaaacc
1141 atctccaaag ccaaagggca gccccgagaa ccacaggtgt acaccctgcc cccatcccgg
1201 gatgagctga ccaagaacca ggtcagcctg acctgcctgg tcaaaggctt ctatcccagc
1261 gacatcgccg tggagtggga gagcaatggg cagccggaga acaactacaa gaccacgcct
1321 cccgtgctgg actccgacgg ctccttcttc ctctacagca agctcaccgt ggacaagagc
1381 aggtggcagc aggggaacgt cttctcatgc tccgtgatgc atgaggctct gcacaaccac
1441 tacacgcaga agagcctctc cctgtctccg ggtaaatgag tgcgacggcc ggcaagcccc
1501 cgctccccag gctctcgggg tcgcgcgagg atgcttggca cgtaccccgt gtacatactt
1561 cccgggcgcc cagcatggaa ataaagcacc cagcgctgcc ctgggcccct gcaaaaaaaa
1621 aaaaaaaaaa
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