LOCUS BC024273 1924 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 28, mRNA (cDNA
clone MGC:39160 IMAGE:4130937), complete cds.
ACCESSION BC024273
VERSION BC024273.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1924)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1924)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: c Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20336295.
FEATURES Location/Qualifiers
source 1..1924
/db_xref="H-InvDB:HIT000039802"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39160 IMAGE:4130937"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1924
/gene="DDX28"
/gene_synonym="FLJ11282"
/gene_synonym="MDDX28"
/db_xref="GeneID:55794"
/db_xref="HGNC:HGNC:17330"
/db_xref="MIM:607618"
CDS 8..1630
/gene="DDX28"
/gene_synonym="FLJ11282"
/gene_synonym="MDDX28"
/codon_start=1
/product="DEAD (Asp-Glu-Ala-Asp) box polypeptide 28"
/protein_id="AAH24273.1"
/db_xref="GeneID:55794"
/db_xref="HGNC:HGNC:17330"
/db_xref="MIM:607618"
/translation="MALARPVRLFSLVTRLLLAPRRGLTVRSPDEPLPVVRIPVALQR
QLEQRQSRRRNLPRPVLVRPGPLLVSARRPELNQPARLTLGRWERAPLASQGWKSRRA
RRDHFSIERAQQEAPAVRKLSSKGSFADLGLEPRVLHALQEAAPEVVQPTTVQSSTIP
SLLRGRHVVCAAETGSGKTLSYLLPLLQRLLGQPSLDSLPIPAPRGLVLVPSRELAQQ
VRAVAQPLGRSLGLLVRDLEGGHGMRRIRLQLSRQPSADVLVATPGALWKALKSRLIS
LEQLSFLVLDEADTLLDESFLELVDYILEKSHIAEGPADLEDPFNPKAQLVLVGATFP
EGVGQLLNKVASPDAVTTITSSKLHCIMPHVKQTFLRLKGADKVAELVHILKHRDRAE
RTGPSGTVLVFCNSSSTVNWLGYILDDHKIQHLRLQGQMPALMRVGIFQSFQKSSRDI
LLCTDIASRGLDSTGVELVVNYDFPPTLQDYIHRAGRVGRVGSEVPGTVISFVTHPWD
VSLVQKIELAARRRRSLPGLASSVKEPLPQAT"
BASE COUNT 414 a 539 c 565 g 406 t
ORIGIN
1 gggaaacatg gctctagcgc ggccggtgcg gctcttttcc ctcgtgactc ggttgctcct
61 ggcgccgcga cggggcctca cggtccgcag tcccgacgaa cccctgccgg tggtgcgcat
121 cccagtggct ctacagcggc agttggaaca gcggcagagc aggcggcgga acctcccgag
181 gccggtgctg gttcgacccg gaccgctgct ggtttcggcg cggcggccgg agttgaacca
241 gccggcgcgc ctcacactgg gccgttggga gcgcgcgccg ctagcctctc aaggctggaa
301 gagtcgacgc gcgcgtcggg accacttctc catcgagcgc gcgcaacagg aggcgccagc
361 ggtgcgaaag ctctcgtcta agggcagctt tgctgacctg ggcctggagc cccgtgtgct
421 gcacgcacta caggaggctg cgcctgaagt cgttcagccc acaaccgtgc agtctagcac
481 catcccctca ctacttcgcg gccgccatgt cgtttgcgcc gcagaaaccg gcagtggcaa
541 gactctcagc tacctcctgc cgctgcttca acggctcttg ggccagccaa gcctggactc
601 ccttcctatc cccgcgcccc gaggcctggt ccttgttcct tcccgagaat tggcccaaca
661 ggtgcgggct gtggcccaac ccttgggccg ctccttgggc ctgctggtgc gggacctgga
721 gggaggccac ggcatgcgta ggatcaggct gcagctgtcc agacagcctt cagcagatgt
781 gcttgtggcc actccagggg ctctgtggaa ggccctgaaa agtcgactga tcagtctgga
841 gcaactctcc ttcttggtgt tggatgaggc agacacactg ctggatgaaa gcttcctgga
901 actggtggac tacatcttag agaagagcca catagcagaa ggcccagctg acttggaaga
961 ccccttcaat cccaaagctc agttagtgct ggtaggagcc acatttcccg aaggtgtagg
1021 ccagttgctg aataaagtcg ccagcccaga tgctgtcacc accatcacca gctccaagct
1081 ccactgtatc atgcctcatg tgaaacagac atttctgaga ctgaagggag cagataaggt
1141 ggccgagctg gtgcacatcc tcaagcatcg tgacagagca gaaaggactg gtccctcagg
1201 aactgttctg gtgttctgta atagctccag cactgtgaac tggctgggat atattctgga
1261 tgaccacaaa atccaacacc taaggttgca ggggcaaatg ccagccttga tgagggtagg
1321 aatcttccag tccttccaga agagctcccg agacatactt ctctgcacag acatagcctc
1381 tcggggcctg gacagcactg gtgtggagct ggttgtcaat tatgatttcc ccccaacgct
1441 gcaagattac atccacagag cagggagagt gggccgtgtg gggagcgagg tgccaggcac
1501 cgtcatcagt tttgtgaccc atccctggga tgtgagcctg gttcagaaga ttgagctggc
1561 ggctcgccga aggagaagtc ttccaggact agcatcctcg gtgaaagagc ctttgcccca
1621 agcaacctga ttttgacaaa tctgattaaa atgtgatgct agaacaggga tctttcccag
1681 tatcttgagt gggtgaccac acttgtcagt gggaggctct gggctgccct gtcggctcct
1741 tgagggcggg atgaactgct ttgtgacttg gaaaggtacg ctgctggcca gcattggaga
1801 agaagctgct gagcatggct ttctgtagtc tttagcaaga cacaagtgga ttttgacttt
1861 gtatcatgtc atgatttcta acaataaatg atgtttttat gtgaaaaaaa aaaaaaaaaa
1921 aaaa
//