LOCUS BC024270 2825 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens TSPY-like 2, mRNA (cDNA clone MGC:39136
IMAGE:2819684), complete cds.
ACCESSION BC024270
VERSION BC024270.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2825)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2825)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 42 Row: a Column: 2
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 11545834.
FEATURES Location/Qualifiers
source 1..2825
/db_xref="H-InvDB:HIT000039799"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:39136 IMAGE:2819684"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2825
/gene="TSPYL2"
/gene_synonym="CDA1"
/gene_synonym="CINAP"
/gene_synonym="CTCL"
/gene_synonym="DENTT"
/gene_synonym="HRIHFB2216"
/gene_synonym="SE20-4"
/db_xref="GeneID:64061"
/db_xref="HGNC:HGNC:24358"
/db_xref="MIM:300564"
CDS 120..2201
/gene="TSPYL2"
/gene_synonym="CDA1"
/gene_synonym="CINAP"
/gene_synonym="CTCL"
/gene_synonym="DENTT"
/gene_synonym="HRIHFB2216"
/gene_synonym="SE20-4"
/codon_start=1
/product="TSPY-like 2"
/protein_id="AAH24270.1"
/db_xref="GeneID:64061"
/db_xref="HGNC:HGNC:24358"
/db_xref="MIM:300564"
/translation="MDRPDEGPPAKTRRLSSSESPQRDPPPPPPPPPLLRLPLPPPQQ
RPRLQEETEAAQVLADMRGVGLGPALPPPPPYVILEEGGIRAYFTLGAECPGWDSTIE
SGYGEAPPPTESLEALPTPEASGGSLEIDFQVVQSSSFGGEGALETCSAVGWAPQRLV
DPKSKEEAIIIVEDEDEDERESMRSSRRRRRRRRRKQRKVKRESRERNAERMESILQA
LEDIQLDLEAVNIKAGKAFLRLKRKFIQMRRPFLERRDLIIQHIPGFWVKAFLNHPRI
SILINRRDEDIFRYLTNLQVQDLRHISMGYKMKLYFQTNPYFTNMVIVKEFQRNRSGR
LVSHSTPIRWHRGQEPQARRHGNQDASHSFFSWFSNHSLPEADRIAEIIKNDLWVNPL
RYYLRERGSRIKRKKQEMKKRKTRGRCEVVIMEDAPDYYAVEDIFSEISDIDETIHDI
KISDFMETTDYFETTDNEITDINENICDSENPDHNEVPNNETTDNNESADDHETTDNN
ESADDNNENPEDNNKNTDDNEENPNNNENTYGNNFFKGGFWGSHGNNQDSSDSDNEAD
EASDDEDNDGNEGDNEGSDDDGNEGDNEGSDDDDRDIEYYEKVIEDFDKDQADYEDVI
EIISDESVEEEGIEEGIQQDEDIYEEGNYEEEGSEDVWEEGEDSDDSDLEDVLQVPNG
WANPGKRGKTG"
BASE COUNT 726 a 753 c 812 g 534 t
ORIGIN
1 gaggagagct ggttgcgtga gtctcctcag ctctgcttac cggtgcgact agcggcagcg
61 acgcggctaa aagcgaaggg gcgagtgcga gtcccctgag ctgtacgaac gcggtcgcca
121 tggaccgccc agatgagggg cctccggcca agacccgccg cctgagcagc tccgagtctc
181 cacagcgcga cccgcccccg ccgccgccgc cgccgccgct cctccgactg ccgctgcctc
241 caccccagca gcgcccgagg ctccaggagg aaacggaggc ggcacaggtg ctggccgata
301 tgaggggggt gggactgggc cccgcgctgc ccccgccgcc tccctatgtc attctcgagg
361 agggggggat ccgcgcatac ttcacgctcg gtgctgagtg tcccggctgg gattctacca
421 tcgagtcggg gtatggggag gcgcccccgc ccacggagag cctggaagca ctccccactc
481 ctgaggcctc gggggggagc ctggaaatcg attttcaggt tgtacagtcg agcagttttg
541 gtggagaggg ggccctagaa acctgtagcg cagtggggtg ggcgccccag aggttagttg
601 acccgaagag caaggaagag gcgatcatca tagtggagga tgaggatgag gatgagcggg
661 agagtatgag gagcagcagg aggcggcggc ggcggcggag gaggaagcag aggaaggtga
721 agagggaaag cagagagaga aatgccgaga ggatggagag catcctgcag gcactggagg
781 atattcagct ggatctggag gcagtgaaca tcaaggcagg caaagccttc ctgcgtctca
841 agcgcaagtt catccagatg cgaagaccct tcctggagcg cagagacctc atcatccagc
901 atatcccagg cttctgggtc aaagcattcc tcaaccaccc cagaatttca attttgatca
961 accgacgtga tgaagacatt ttccgctact tgaccaatct gcaggtacag gatctcagac
1021 atatctccat gggctacaaa atgaagctgt acttccagac taacccctac ttcacaaaca
1081 tggtgattgt caaggagttc cagcgcaacc gctcaggccg gctggtgtct cactcaaccc
1141 caatccgctg gcaccggggc caggaacccc aggcccgtcg tcacgggaac caggatgcga
1201 gccacagctt tttcagctgg ttctcaaacc atagcctccc agaggctgac aggattgctg
1261 agattatcaa gaatgatctg tgggttaacc ctctacgcta ctacctgaga gaaaggggct
1321 ccaggataaa gagaaagaag caagaaatga agaaacgtaa aaccaggggc agatgtgagg
1381 tggtgatcat ggaagacgcc cctgactatt atgcagtgga agacattttc agcgagatct
1441 cagacattga tgagacaatt catgacatca agatctctga cttcatggag accaccgact
1501 acttcgagac cactgacaat gagataactg acatcaatga gaacatctgc gacagcgaga
1561 atcctgacca caatgaggtc cccaacaacg agaccactga taacaacgag agtgctgatg
1621 accacgaaac cactgacaac aatgagagtg cagatgacaa caacgagaat cctgaagaca
1681 ataacaagaa cactgatgac aacgaagaga accctaacaa caacgagaac acttacggca
1741 acaacttctt caaaggtggc ttctggggca gccatggcaa caaccaggac agcagcgaca
1801 gtgacaatga agcagatgag gccagtgatg atgaagataa tgatggcaac gaaggtgaca
1861 atgagggcag tgatgatgat ggcaatgaag gtgacaatga aggcagcgat gatgacgaca
1921 gagacattga gtactatgag aaagttattg aagactttga caaggatcag gctgactacg
1981 aggacgtgat agagatcatc tcagacgaat cagtggaaga agagggcatt gaggaaggca
2041 tccagcaaga tgaggacatc tatgaggaag gaaactatga ggaggaagga agtgaagatg
2101 tctgggaaga aggggaagat tcggacgact ctgacctaga ggatgtgctt caggtcccaa
2161 acggttgggc caatccgggg aagaggggga aaaccggata agggttttcc ccttttgggg
2221 atcacctctc tgtatccccc acccactatc ccatttgccc tcctcctcag ctagggccac
2281 gcggccccac attgcacttc tggggggtga ccgacttcgt acacgggttt aaagtttatt
2341 tttatggttt agtcattgca gagttcttat tttgggggga gggaaagggg gctagtcccc
2401 ttcttttggc cctccgcccc cgcaggcttc tgtgtgctgc taactgtatt tattgtgatg
2461 ccttggtcag ggcccctcta cccacttctc ccagtcagtt gtggccccag cccctctccc
2521 tgtgctgtgt ggagtggaca ccctgacccc cgaagcgggg agggccgctg tggccttcgt
2581 cacagccgcg cagtgcccat ggaggcgctg ctgccacctt cctctcccaa gttctttctc
2641 catccctctc ctcttcccgc cgcgccgcta gcccgcctcg gtgtctatgc aaggccgctt
2701 cgccattgcg gtattctttg cggtattctt gtccccgtcc cccagaaggc tcgcctctcc
2761 ccgtggaccc tgttaatccc aataaaattc tgagcaagtt caaaaaaaaa aaaaaaaaaa
2821 aaaaa
//