LOCUS BC024269 1177 bp mRNA linear HUM 28-SEP-2004 DEFINITION Homo sapiens major histocompatibility complex, class II, DR beta 1, mRNA (cDNA clone MGC:39133 IMAGE:4852401), complete cds. ACCESSION BC024269 VERSION BC024269.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1177) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1177) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 42 Row: g Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18641372. FEATURES Location/Qualifiers source 1..1177 /db_xref="H-InvDB:HIT000039798" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:39133 IMAGE:4852401" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1177 /gene="HLA-DRB1" /gene_synonym="HLA-DR1B" /db_xref="GeneID:3123" /db_xref="MIM:142857" CDS 44..844 /gene="HLA-DRB1" /gene_synonym="HLA-DR1B" /codon_start=1 /product="HLA-DRB1 protein" /protein_id="AAH24269.1" /db_xref="GeneID:3123" /db_xref="MIM:142857" /translation="MVCLKFPGGSCMAALTVTLMVLSSPLALAGDTRPRFLEQVKHEC HFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAVTELGRPSAEYWNSQKDLLEQRRA AVDTYCRHNYGVVESFTVQRRVYPEVTVYPAKTQPLQHHNLLVCSVNGFYPGSIEVRW FRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSLTSPLTVEWR ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS" BASE COUNT 262 a 326 c 323 g 266 t ORIGIN 1 ctcacctgct cctctggccc ctggtcctgt cctgttctcc agcatggtgt gtctgaagtt 61 ccctggaggc tcctgcatgg cagctctgac agtgacactg atggtgctga gctccccact 121 ggctttggct ggggacaccc gaccacgttt cttggagcag gttaaacatg agtgtcattt 181 cttcaacggg acggagcggg tgcggttcct ggacagatac ttctatcacc aagaggagta 241 cgtgcgcttc gacagcgacg tgggggagta ccgggcggtg acggagctgg ggcggcctag 301 cgccgagtac tggaacagcc agaaggacct cctggagcag aggcgggccg cggtggacac 361 ctactgcaga cacaactacg gggttgtgga gagcttcaca gtgcagcggc gagtctatcc 421 tgaggtgact gtgtatcctg caaagaccca gcccctgcag caccacaacc tcctggtctg 481 ctctgtgaat ggtttctatc caggcagcat tgaagtcagg tggttccgga acggccagga 541 agagaagact ggggtggtgt ccacaggcct gatccagaat ggagactgga ccttccagac 601 cctggtgatg ctggaaacag ttcctcggag tggagaggtt tacacctgcc aagtggagca 661 cccaagcctg acgagccctc tcacagtgga atggagagca cggtctgaat ctgcacagag 721 caagatgctg agtggagtcg ggggcttcgt gctgggcctg ctcttccttg gggccgggct 781 gttcatctac ttcaggaatc agaaaggaca ctctggactt cagccaacag gattcctgag 841 ctgaagtgaa gatgaccaca ttcaaggaag aaccttctgc cccagctttg caggatgaaa 901 cacttccccg cttggctctc attcttccac aagagagacc tttctccgga cctggttgct 961 actggttcag cagctctgca gaaaatgtcc tcccttgtgg ctgcctcagc tcgtaccttt 1021 ggcctgaagt cccagcatta atggcagccc ctcatcttcc aagttttgtg ctccccttta 1081 cctaatgctt cctgcctccc atgcatctgt actcctgctg tgccacaaac acattacatt 1141 attaaatgtt tctcaaacaa aaaaaaaaaa aaaaaaa //