LOCUS       BC024269                1177 bp    mRNA    linear   HUM 28-SEP-2004
DEFINITION  Homo sapiens major histocompatibility complex, class II, DR beta 1,
            mRNA (cDNA clone MGC:39133 IMAGE:4852401), complete cds.
ACCESSION   BC024269
VERSION     BC024269.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1177)
  AUTHORS   Director MGC Project.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-FEB-2002) National Institutes of Health, Mammalian
            Gene Collection (MGC), Cancer Genomics Office, National Cancer
            Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
            USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Louis Staudt
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
            Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
            Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
            Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
            Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
            Schein, Asim Siddiqui, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 42 Row: g Column: 18
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18641372.
FEATURES             Location/Qualifiers
     source          1..1177
                     /db_xref="H-InvDB:HIT000039798"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:39133 IMAGE:4852401"
                     /tissue_type="Primary B-Cells from Tonsils"
                     /clone_lib="NIH_MGC_48"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1177
                     /gene="HLA-DRB1"
                     /gene_synonym="HLA-DR1B"
                     /db_xref="GeneID:3123"
                     /db_xref="MIM:142857"
     CDS             44..844
                     /gene="HLA-DRB1"
                     /gene_synonym="HLA-DR1B"
                     /codon_start=1
                     /product="HLA-DRB1 protein"
                     /protein_id="AAH24269.1"
                     /db_xref="GeneID:3123"
                     /db_xref="MIM:142857"
                     /translation="MVCLKFPGGSCMAALTVTLMVLSSPLALAGDTRPRFLEQVKHEC
                     HFFNGTERVRFLDRYFYHQEEYVRFDSDVGEYRAVTELGRPSAEYWNSQKDLLEQRRA
                     AVDTYCRHNYGVVESFTVQRRVYPEVTVYPAKTQPLQHHNLLVCSVNGFYPGSIEVRW
                     FRNGQEEKTGVVSTGLIQNGDWTFQTLVMLETVPRSGEVYTCQVEHPSLTSPLTVEWR
                     ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPTGFLS"
BASE COUNT          262 a          326 c          323 g          266 t
ORIGIN      
        1 ctcacctgct cctctggccc ctggtcctgt cctgttctcc agcatggtgt gtctgaagtt
       61 ccctggaggc tcctgcatgg cagctctgac agtgacactg atggtgctga gctccccact
      121 ggctttggct ggggacaccc gaccacgttt cttggagcag gttaaacatg agtgtcattt
      181 cttcaacggg acggagcggg tgcggttcct ggacagatac ttctatcacc aagaggagta
      241 cgtgcgcttc gacagcgacg tgggggagta ccgggcggtg acggagctgg ggcggcctag
      301 cgccgagtac tggaacagcc agaaggacct cctggagcag aggcgggccg cggtggacac
      361 ctactgcaga cacaactacg gggttgtgga gagcttcaca gtgcagcggc gagtctatcc
      421 tgaggtgact gtgtatcctg caaagaccca gcccctgcag caccacaacc tcctggtctg
      481 ctctgtgaat ggtttctatc caggcagcat tgaagtcagg tggttccgga acggccagga
      541 agagaagact ggggtggtgt ccacaggcct gatccagaat ggagactgga ccttccagac
      601 cctggtgatg ctggaaacag ttcctcggag tggagaggtt tacacctgcc aagtggagca
      661 cccaagcctg acgagccctc tcacagtgga atggagagca cggtctgaat ctgcacagag
      721 caagatgctg agtggagtcg ggggcttcgt gctgggcctg ctcttccttg gggccgggct
      781 gttcatctac ttcaggaatc agaaaggaca ctctggactt cagccaacag gattcctgag
      841 ctgaagtgaa gatgaccaca ttcaaggaag aaccttctgc cccagctttg caggatgaaa
      901 cacttccccg cttggctctc attcttccac aagagagacc tttctccgga cctggttgct
      961 actggttcag cagctctgca gaaaatgtcc tcccttgtgg ctgcctcagc tcgtaccttt
     1021 ggcctgaagt cccagcatta atggcagccc ctcatcttcc aagttttgtg ctccccttta
     1081 cctaatgctt cctgcctccc atgcatctgt actcctgctg tgccacaaac acattacatt
     1141 attaaatgtt tctcaaacaa aaaaaaaaaa aaaaaaa
//