LOCUS BC024221 1372 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ATG3 autophagy related 3 homolog (S. cerevisiae), mRNA
(cDNA clone MGC:15201 IMAGE:3938447), complete cds.
ACCESSION BC024221
VERSION BC024221.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1372)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1372)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC024221.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: d Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147490.
FEATURES Location/Qualifiers
source 1..1372
/db_xref="H-InvDB:HIT000039775"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15201 IMAGE:3938447"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1372
/gene="ATG3"
/gene_synonym="APG3"
/gene_synonym="DKFZp564M1178"
/gene_synonym="FLJ22125"
/gene_synonym="MGC15201"
/gene_synonym="PC3-96"
/db_xref="GeneID:64422"
/db_xref="HGNC:HGNC:20962"
/db_xref="MIM:609606"
CDS 111..1055
/gene="ATG3"
/gene_synonym="APG3"
/gene_synonym="DKFZp564M1178"
/gene_synonym="FLJ22125"
/gene_synonym="MGC15201"
/gene_synonym="PC3-96"
/codon_start=1
/product="ATG3 autophagy related 3 homolog (S.
cerevisiae)"
/protein_id="AAH24221.1"
/db_xref="GeneID:64422"
/db_xref="HGNC:HGNC:20962"
/db_xref="MIM:609606"
/translation="MQNVINTVKGKALEVAEYLTPVLKESKFKETGVITPEEFVAAGD
HLVHHCPTWQWATGEELKVKAYLPTGKQFLVTKNVPCYKRCKQMEYSDELEAIIEEDD
GDGGWVDTYHNTGITGITEAVKEITLENKDNIRLQDCSALCEEEEDEDEGEAADMEEY
EESGLLETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLYITYDKYYQTPRLWLF
GYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHPCRHAEVMKKIIET
VAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYTRHFTM"
BASE COUNT 542 a 234 c 290 g 306 t
ORIGIN
1 cgggtgctga tgcgagtcgg tggcagcgag gacattttct gactccctgg cccctgacac
61 ggctgcactt tccatcccgt cgcggggccg gccgctactc cggccccagg atgcagaatg
121 tgattaatac tgtgaaggga aaggcactgg aagtggctga gtacctgacc ccggtcctca
181 aggaatcaaa gtttaaggaa acaggtgtaa ttaccccaga agagtttgtg gcagctggag
241 atcacctagt ccaccactgt ccaacatggc aatgggctac aggggaagaa ttgaaagtga
301 aggcatacct accaacaggc aaacaatttt tggtaaccaa aaatgtgccg tgctataagc
361 ggtgcaaaca gatggaatat tcagatgaat tggaagctat cattgaagaa gatgatggtg
421 atggcggatg ggtagataca tatcacaaca caggtattac aggaataacg gaagccgtta
481 aagagatcac actggaaaat aaggacaata taaggcttca agattgctca gcactatgtg
541 aagaggaaga agatgaagat gaaggagaag ctgcagatat ggaagaatat gaagagagtg
601 gattgttgga aacagatgag gctaccctag atacaaggaa aatagtagaa gcttgtaaag
661 ccaaaactga tgctggcggt gaagatgcta ttttgcaaac cagaacttat gacctttaca
721 tcacttatga taaatattac cagactccac gattatggtt gtttggctat gatgagcaac
781 ggcagccttt aacagttgag cacatgtatg aagacatcag tcaggatcat gtgaagaaaa
841 cagtgaccat tgaaaatcac cctcatctgc caccacctcc catgtgttca gttcacccat
901 gcaggcatgc tgaggtgatg aagaaaatca ttgagactgt tgcagaagga gggggagaac
961 ttggagttca tatgtatctt cttattttct tgaaatttgt acaagctgtc attccaacaa
1021 tagaatatga ctacacaaga cacttcacaa tgtaatgaag agagcataaa atctatccta
1081 attattggtt ctgattttta aagaattaac ccatagatgt gaccattgac catattcatc
1141 aatatataca gtttctctaa taagggactt atatgtttat gcattaaata aaaatatgtt
1201 ccactaccag ccttacttgt ttaataaaaa tcagtgcaaa gaaaaaaaaa aaaaaaaaaa
1261 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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