LOCUS BC024217 2540 bp mRNA linear HUM 24-JAN-2005 DEFINITION Homo sapiens ubiquitin protein ligase E3 component n-recognin 2, mRNA (cDNA clone IMAGE:3837513), complete cds. ACCESSION BC024217 VERSION BC024217.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2540) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2540) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (26-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC024217.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 14 Row: i Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27597060 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2540 /db_xref="H-InvDB:HIT000050884" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:3837513" /tissue_type="Ovary, adenocarcinoma" /clone_lib="NIH_MGC_9" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2540 /gene="UBR2" /gene_synonym="bA49A4.1" /gene_synonym="C6orf133" /gene_synonym="dJ242G1.1" /gene_synonym="dJ392M17.3" /gene_synonym="KIAA0349" /db_xref="GeneID:23304" /db_xref="MIM:609134" CDS 278..1597 /gene="UBR2" /gene_synonym="bA49A4.1" /gene_synonym="C6orf133" /gene_synonym="dJ242G1.1" /gene_synonym="dJ392M17.3" /gene_synonym="KIAA0349" /codon_start=1 /product="UBR2 protein" /protein_id="AAH24217.1" /db_xref="GeneID:23304" /db_xref="MIM:609134" /translation="MASELEPEVQAIDRSLLECSAEEIAGKWLQATDLTREVYQHLAH YVPKIYCRGPNPFPQKEDMLAQHVLLGPMEWYLCGEDPAFGFPKLEQANKPSHLCGRV FKVGEPTYSCRDCAVDPTCVLCMECFLGSIHRDHRYRMTTSGGGGFCDCGDTEAWKEG PYCQKHELNTSEIEEEEDPLVHLSEDVIARTYNIFAITFRYAVEILTWEKESELPADL EMVEKSDTYYCMLFNDEVHTYEQVIYTLQKAVNCTQKEAIGFATTVDRDGRRSVRYGD FQYCEQAKSVIVRNTSRQTKPLKVQVMHSSIVAHQNFGLKLLSWLGSIIGYSDGLRRI LCQVGLQEGPDGENSSLVDRLMLSDSKLWKGARSVYHQLFMSSLLMDLKYKKLFAVRF AKNYERLQSDYVTDDHDREFSVADLSVQIFTVPSLFSISAGRSGSPL" BASE COUNT 737 a 485 c 602 g 716 t ORIGIN 1 gagtgtcagg cctggggttt tctgtgtcct tccctgggtc agggacgagc cagtgacttg 61 actcttgggc gctaagcttg ggagggagcg caggaggccg ctgtccttcc tttccggttc 121 acgtcaccct tctctccctc tgttgctcca cctgcagcca cttggacggc tccgggactg 181 attgcctggg gcaggggtgg cagtcgaggc cgccggggcc gaggtgaggc tgcagctctc 241 cgggcggcgg tagcgctggg gaggaggagg agagaagatg gcgtcggagc tagagccaga 301 ggtgcaggcc atcgaccgga gcttgctgga atgttcggcc gaggagattg cggggaaatg 361 gctgcaagca actgacctca ctagagaagt gtaccagcat ttagcccact atgtacccaa 421 aatctactgc aggggtccca acccttttcc acagaaagaa gacatgctgg cacagcatgt 481 tttgttggga ccaatggaat ggtacctttg tggtgaagat cctgcatttg gatttccaaa 541 acttgagcaa gcaaacaaac cttctcatct ttgtggtcgt gtttttaaag taggagagcc 601 tacatattct tgcagagact gtgcagttga tccaacttgt gttttgtgca tggagtgctt 661 tttgggaagt attcacagag atcatcgata taggatgaca acatcaggag gtggaggttt 721 ctgtgactgt ggtgatactg aagcctggaa agagggtcct tactgtcaaa aacatgaact 781 taacacctct gaaattgagg aagaagagga tcctcttgtt catttatcag aagatgtgat 841 agcaagaact tataacattt ttgctattac gtttcggtat gcagtagaaa tattaacctg 901 ggaaaaagaa agtgaattgc cagcagattt agagatggta gagaagagtg acacctacta 961 ttgcatgctg tttaatgatg aggttcacac ctacgaacaa gttatttata ctcttcagaa 1021 agctgttaac tgtacacaaa aagaagctat tggttttgca actacagtag atcgagatgg 1081 gcgtaggtct gttcgatatg gagattttca gtattgtgag caagcaaaat cagtaattgt 1141 gagaaatacc agtagacaga caaagccact caaagttcaa gttatgcatt cgtctattgt 1201 cgcacatcag aattttggtt tgaaactttt gtcttggctg ggaagtatta ttggatattc 1261 agatggcctt cgccggattt tatgtcaagt tggtttacaa gaagggccag atggtgaaaa 1321 ctcttctcta gtggacagac tgatgcttag tgattccaaa ttatggaaag gtgctaggag 1381 tgtatatcat cagttgttca tgagcagtct gcttatggat ttgaaataca agaaactatt 1441 tgctgttcga tttgcaaaaa actatgagcg tttgcagagt gattatgtga cagatgacca 1501 cgacagagag ttttcagtcg cagacctctc ggttcagata ttcacggttc cttcactttt 1561 ctctatctct gctgggcgca gtggctcacc tctgtaatcc tagccaaggc aggtggatca 1621 cctgagctta ggagtctgag accagcctgg ccaacatggt gaaaccccat ctctactaaa 1681 aatagaaaaa ttagccaggc gtggtggcgc acgcctgagg ctgaggcaga agaatcactt 1741 gaacccagga ggcggaggtt gcagtgagct gagatcaagc cattgcactc cagcctgggc 1801 gacagagcga gattcggtat ccaaaaaaaa aaagttcttg ctctgtcact caggctggag 1861 tgaggtggca cgatcacagc tcactgcagc tttgaccacc tgggcttagg caatcctcct 1921 gtctcagcct cccaagtagc tgggaccaca gatgcatgcc accacaccca gctagtctta 1981 acatttttaa attaagctta tatggtttat atttttgatg ctgtagtaaa ctttttatat 2041 ttttgatgct gtagtaaact ttttatattt ttaaacaggc tatggtagta tttaggaaaa 2101 ctactgattt ttatatgtcc atcttatatc tgtctggtct atctggatat gtatgtattc 2161 agattaaata ggttctacca gactcttttc cataatggtt aaaccaattc atgcttctgt 2221 taataacgta tgaaagtgat agttgctcca catcctcacc aacacttggt tttaccagtc 2281 ttttaagatt ttatctattc tagtgggaca tagtggtttc tcattatggt tttaatttgc 2341 attcttctga tgatgatgaa gctgaattcc tttttatatg tttattggca tttggatata 2401 ctcctttgtg aatccctgtt aaagttgtcc tttgattatc taaaaaaaaa aaaaaaaaaa 2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 2521 aaaaaaaaaa aaaaaaaaaa //