LOCUS BC024211 2802 bp mRNA linear HUM 08-SEP-2006
DEFINITION Homo sapiens non-SMC condensin I complex, subunit H, mRNA (cDNA
clone MGC:4616 IMAGE:3504782), complete cds.
ACCESSION BC024211
VERSION BC024211.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Nov 6, 2003 this sequence version replaced BC024211.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 11 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25121986.
FEATURES Location/Qualifiers
source 1..2802
/db_xref="H-InvDB:HIT000039772"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:4616 IMAGE:3504782"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2802
/gene="NCAPH"
/gene_synonym="CAP-H"
/gene_synonym="HCAP-H"
/db_xref="GeneID:23397"
/db_xref="HGNC:HGNC:1112"
/db_xref="MIM:602332"
CDS 44..2269
/gene="NCAPH"
/gene_synonym="CAP-H"
/gene_synonym="HCAP-H"
/codon_start=1
/product="non-SMC condensin I complex, subunit H"
/protein_id="AAH24211.1"
/db_xref="GeneID:23397"
/db_xref="HGNC:HGNC:1112"
/db_xref="MIM:602332"
/translation="MGPPGPALPATMNNSSSETRGHPHSASSPSERVFPMPLPRKAPL
NIPGTPVLEDFPQNDDEKERLQRRRSRVFDLQFSTDSPRLLASPSSRSIDISATIPKF
TNTQITEHYSTCIKLSTENKITTKNAFGLHLIDFMSEILKQKDTEPTNFKVAAGTLDA
STKIYAVRVDAVHADVYRVLGGLGKDAPSLEEVEGHVADGSATEMGTTKKAVKPKKKH
LHRTIEQNINNLNVSEADRKCEIDPMFQKTAASFDECSTAGVFLSTLHCQDYRSELLF
PSDVQTLSTGEPLELPELGCVEMTDLKAPLQQCAEDRQICPSLAGFQFTQWDSETHNE
SVSALVDKFKKNDQVFDINAEVDESDCGDFPDGSLGDDFDANDEPDHTAVGDHEEFRS
WKEPCQVQSCQEEMISLGDGDIRTMCPLLSMKPGEYSYFSPRTMSMWAGPDHWRFRPR
RKQDAPSQSENKKKSTKKDFEIDFEDDIDFDVYFRKTKAATILTKSTLENQNWRATTL
PTDFNYNVDTLVQLHLKPGTRLLKMAQGHRAETEHYEEIEDYDYNNPNDTSNFCPGLQ
AADSDDEDLDDLFVGPVGNSDLSPYPCHPPKTAQQNGDTPEAQGLDITTYGESNLVAE
PQKVNKIEIHYAKTAKKMDMKKLKQSMWSLLTALSGKEADAEANHREAGKEAALAEVA
DEKMLSGLTKDLQRSLPPVMAQNLSIPLAFACLLHLANEKNLKLEGTEDLSDVLVRQG
D"
BASE COUNT 829 a 662 c 659 g 652 t
ORIGIN
1 gacgcgcgcg atttaaaacc agctcaggag acgccaagga aagatgggac ctcccggccc
61 agcactgcca gccacaatga ataactcttc ttcagagacg cgaggacacc cccacagtgc
121 ctcctctcct tcagagcgtg tgttcccgat gcccctgccc aggaaggcgc ctctcaatat
181 tcctggcacc ccagtcctcg aagactttcc tcagaatgac gatgagaagg agcggctgca
241 gcggaggcgc tcgagggtct ttgatctgca gttcagcact gactcacctc gcttattggc
301 ctccccctcc agcaggagta ttgacatttc agctactatc cccaagttta caaacacgca
361 gattacggaa cattactcca cctgtatcaa actgtccact gaaaataaaa tcactaccaa
421 gaatgctttt ggtttgcact tgattgattt tatgtcagag attcttaaac agaaagacac
481 cgaaccaacc aactttaaag tggctgcggg tactctggat gccagcacca agatctatgc
541 tgtgcgcgtg gatgccgtcc atgccgatgt atacagagtc cttggggggc tgggcaaaga
601 tgcaccgtct ttggaagaag tagaaggcca tgttgctgat ggaagtgcta ctgaaatggg
661 aacaaccaaa aaggctgtaa agccaaagaa gaagcactta cacagaacta ttgagcagaa
721 cataaacaac ctcaatgtct ccgaagcaga tcggaagtgt gagattgatc ccatgtttca
781 gaagacagca gcctcatttg atgagtgcag cacagcaggg gtgtttctgt ccactctcca
841 ctgccaggac tacagaagtg aactgctgtt tccctctgat gtccagactc tctccacggg
901 agaacctctc gagttgccag agttaggttg tgtagaaatg acagatttaa aagcgccctt
961 gcagcagtgt gcagaagatc gccagatctg cccttccctg gccgggttcc agtttacaca
1021 gtgggacagt gaaacacata atgagtctgt gtcggccctg gtagacaagt ttaagaagaa
1081 tgaccaggta tttgacatca atgctgaagt tgacgagagt gactgtggag acttccccga
1141 tgggtccctg ggggatgact ttgatgccaa cgacgaacct gaccacaccg cagttgggga
1201 tcatgaagag ttcaggagct ggaaggagcc ctgccaggtt cagagctgcc aggaagaaat
1261 gatttccctt ggggatggag acatcaggac catgtgcccc cttctgtcta tgaaacctgg
1321 agaatattct tatttcagtc ctcggaccat gtcgatgtgg gctggcccgg atcactggcg
1381 ctttaggcct cgacgcaaac aagatgctcc ttcccaatca gaaaacaaaa agaagagtac
1441 aaaaaaagat tttgaaattg actttgaaga tgatattgac tttgatgtat attttagaaa
1501 aacaaaggct gctactattc tgaccaagtc cactttggag aaccagaatt ggagagctac
1561 cacccttcct acagatttca actacaatgt tgacactctg gtccagcttc acctcaaacc
1621 aggcaccagg ttacttaaga tggcccaggg ccatagggca gagactgagc attatgaaga
1681 aattgaagac tatgattaca acaaccctaa cgacacctcc aacttttgcc ctggattaca
1741 ggctgctgac agtgatgatg aagatttgga tgacttattt gtgggacctg ttgggaactc
1801 tgacctctca ccttatcctt gccatccacc taagacagca caacagaatg gtgacactcc
1861 agaagcccaa ggattagaca tcacaacata tggggagtca aacttggtag ctgagcctca
1921 gaaggtaaat aaaattgaaa ttcactatgc caagactgcc aaaaagatgg acatgaagaa
1981 actgaagcag agcatgtgga gtctgctgac agcgctctcc ggaaaggagg cagatgcaga
2041 ggcaaaccac agggaagctg gaaaagaagc ggccctggca gaagtggctg acgagaagat
2101 gcttagcggg ctcacgaagg acctgcagag gagcctgccc cctgtcatgg ctcagaacct
2161 ctccatacct ctggcttttg cctgtctcct acatttagcc aatgaaaaga atctaaaact
2221 ggaaggaaca gaggaccttt ctgatgttct tgtgaggcaa ggagattgag ttcactatgg
2281 agaagtcagc agcaggaggc ccatccctta ctcagttgcc gggacatccc cagtctcggg
2341 ggaagaagat gccatgggct tatacccagg ctgtagccaa ctaccaacgt gcctgtttgt
2401 ttgttgctct ttccttctct ccatcatagt ctgggtgcca gcgccctgaa gctccgtgct
2461 caactgatta aactttactg ccctatggtg accatctagg agaggggagg gcagaggggg
2521 tgagggtact attctggatt gagaaaacct atatccattc tttatatcaa tgtatagttt
2581 tagtctccta aattgatctg ttattttcca aactattctc ttgtagaaaa ttttccagtg
2641 ggcacttaat ggtgcccttg aagaacttcc taatccatgt acataaaata catcatatgt
2701 acacttataa atgtatatag aatgctcaaa aataaaattc ttaataatag aactggcaaa
2761 ataaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa
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