LOCUS BC024193 1745 bp mRNA linear HUM 09-MAR-2007
DEFINITION Homo sapiens tetratricopeptide repeat domain 29, mRNA (cDNA clone
MGC:33344 IMAGE:4825866), complete cds.
ACCESSION BC024193
VERSION BC024193.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1745)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1745)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC024193.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 46 Row: n Column: 11
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 13994357.
FEATURES Location/Qualifiers
source 1..1745
/db_xref="H-InvDB:HIT000039762"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:33344 IMAGE:4825866"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..1745
/gene="TTC29"
/gene_synonym="NYD-SP14"
/db_xref="GeneID:83894"
/db_xref="HGNC:HGNC:29936"
CDS 174..1133
/gene="TTC29"
/gene_synonym="NYD-SP14"
/codon_start=1
/product="TTC29 protein"
/protein_id="AAH24193.1"
/db_xref="GeneID:83894"
/db_xref="HGNC:HGNC:29936"
/translation="MTTLPPLPMTRPKLTALARQKLPCSSRKIPRSQLIKEKDDIDHY
LEVNFKGLSKEEVAAYRNSYKKNICVDMLRDGYHKSFTELFALMERWDALREAARVRS
LFWLQKPLEEQPDKLDYLYHYLTRAEDAERKESFEDVYNNLYALACYFNNSEDKWVRN
HFYERCFKIAQLIKIDCGKKEAEAHMHMGLLYEEDGQLLEAAEHYEAFHQLTQGRIWK
DETGRSLNLLACESLLRTYRLLSDKMLENKEYKQAIKILIKASEIAKEGSDKKMEAET
SYYLGLAHLAAEEYETALTVLDTYCKSPQTWMMISVWGEAMKP"
BASE COUNT 579 a 359 c 409 g 398 t
ORIGIN
1 aggcttcgga atcactgaga gaggaggggg cagcgccaac gcccagcacc tgccgccggt
61 gggggactga cttcggcgga acggaaaact ggagttgttt ccctgggcca gtgcaccgag
121 gctgaagtct ataagcctgg agagaccatc agcagtaatc tgcaaattcc gaaatgacca
181 ccctgccccc actgcccatg acacgcccga agcttacagc cttagccaga cagaagctgc
241 cttgctcctc cagaaaaatt ccaaggtctc aattgatcaa agaaaaagat gacatagatc
301 attatctaga ggtaaatttc aaaggattat caaaagagga agttgctgct tataggaact
361 cctacaagaa gaatatctgt gtggacatgc tgcgagatgg ttatcataag tccttcaccg
421 agctcttcgc tctgatggag cggtgggatg ccctgaggga ggctgcgaga gtcaggtccc
481 tcttctggct gcagaagccc ctggaggagc agcctgataa actggattac ctgtaccatt
541 acctgaccag ggctgaggac gctgagagga aagaatcctt cgaagatgta tataataact
601 tgtatgctct ggcctgttac ttcaataatt ctgaagacaa gtgggtaagg aaccacttct
661 atgaacgatg ttttaagatt gctcagctga tcaaaattga ctgtgggaag aaagaagccg
721 aggcacacat gcatatgggt cttctctacg aggaagatgg tcagcttctg gaagctgctg
781 agcattatga agcattccat caattgacac aggggcggat atggaaggat gagacaggcc
841 gctctctcaa cttgttggcc tgtgagagtc tcctgaggac ttacagatta ctctcagaca
901 aaatgctaga aaataaagaa tacaaacagg ccatcaaaat tctaataaaa gcttctgaaa
961 tagccaaaga aggaagtgac aaaaagatgg aagcggaaac ctcttactac ttgggcttag
1021 cacacttagc tgctgaggaa tatgaaacag cattaacagt ccttgacact tactgtaaat
1081 ctccacagac ctggatgatg atctcagtct ggggagaggc tatgaagcca tagccaaggt
1141 cctgcagagc caaggagaga tgacagaagc aattaaatac ttgaaaaaat ttgtgaaaat
1201 tgcaagaaac aattttcaaa gcctagattt ggtgagagca agtacaatgc ttggggacat
1261 ctacaatgaa aaaggatact acaacaaagc ttctgaatgc tttcagcaag cttttgacac
1321 aacagtagag ctaatgagca tgcctctgat ggatgagaca aaagttcact atggaatagc
1381 aaaagctcat cagatgatgc ttacagtgaa caactatata gagtctgcag atctcaccag
1441 cctcaactac ctgctgtcat ggaaggagag cagaggtaac attgaacctg atccagttac
1501 tgaagagttt agaggatcca cagtggaagc tgtatctcaa aactcagaac gtttggaaga
1561 actcagtagg tttccaggtg atcaaaaaaa tgaaacttaa agcagctttt cacttaacat
1621 caaagcaaga agaaatccat catgtcacct tagacttcaa tacttgtaat aggagcatgt
1681 tacagataat atagagttat aataaaacgg actatgactc ttttcattga aaaaaaaaaa
1741 aaaaa
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