LOCUS BC024187 3587 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens DEAH (Asp-Glu-Ala-His) box polypeptide 40, mRNA (cDNA clone MGC:26626 IMAGE:4822080), complete cds. ACCESSION BC024187 VERSION BC024187.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3587) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3587) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC024187.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 33 Row: c Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31542728. FEATURES Location/Qualifiers source 1..3587 /db_xref="H-InvDB:HIT000039757" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:26626 IMAGE:4822080" /tissue_type="Testis" /clone_lib="NIH_MGC_97" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3587 /gene="DHX40" /gene_synonym="ARG147" /gene_synonym="FLJ22060" /gene_synonym="PAD" /db_xref="GeneID:79665" /db_xref="HGNC:HGNC:18018" /db_xref="MIM:607570" CDS 63..2402 /gene="DHX40" /gene_synonym="ARG147" /gene_synonym="FLJ22060" /gene_synonym="PAD" /codon_start=1 /product="DEAH (Asp-Glu-Ala-His) box polypeptide 40" /protein_id="AAH24187.1" /db_xref="GeneID:79665" /db_xref="HGNC:HGNC:18018" /db_xref="MIM:607570" /translation="MSRFPAVAGRAPRRQEEGERSRDLQEERLSAVCIADREEKGCTS QEGGTTPTFPIQKQRKKIIQAVRDNSFLIVTGNTGSGKTTQLPKYLYEAGFSQHGMIG VTQPRKVAAISVAQRVAEEMKCTLGSKVGYQVRFDDCSSKETAIKYMTDGCLLKHILG DPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELAKL SAFFGNCPIFDIPGRLYPVREKFCNLIGPRDRENTAYIQAIVKVTMDIHLNEMAGDIL VFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTTDQQRRIFLPP PPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPISKSEALQ RSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDVIRFP YLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAASLDCE DLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFNDFATLAVIFEQCKSS GAPASWCQKHWIHWRCLFSAFRVEAQLRELIRKLKQQSDFPKETFEGPKHEVLRRCLC AGYFKNVARRSVGRTFCTMDGRGSPVHIHPSSALHEQETKLEWIIFHEVLVTTKVYAR IVCPIRYEWVRDLLPKLHEFNAHDLSSVARREVREDARRRWTNKENVKQLKDGISKDV LKKMQRRNDDKSISDARARFLERKQQRTQDHSDTRKETG" BASE COUNT 1106 a 666 c 771 g 1044 t ORIGIN 1 gtctttcccc tcccatctcc tcagatcggt ggacgtgctc gcctccactc ggggccaggt 61 ctatgtcccg gtttcccgca gtcgcgggca gggcgccaag gcggcaggag gagggtgagc 121 ggtcaagaga cctccaggaa gagcggctct cggctgtttg catcgccgat agagaagaga 181 aaggatgcac gtcccaggag ggaggaacta ctccaacttt tcctattcag aaacaaagaa 241 aaaagattat tcaagctgtg agggacaatt cattccttat tgttactgga aatacaggaa 301 gtggtaaaac aactcaactc ccaaaatatc tatatgaagc agggttttca caacatggta 361 tgattggtgt aactcaacca cgaaaagtag ctgctatatc agttgctcag agagtagctg 421 aagaaatgaa atgcactttg ggatccaaag taggatacca agttcgtttt gatgattgca 481 gttctaagga gacagcaatc aaatatatga ctgatggatg tttactgaaa catattctgg 541 gagacccaaa tcttaccaaa ttcagtgtca ttattttgga tgaagcccat gaaagaactc 601 taactacaga tatcttattt ggtttattga agaagctatt tcaggagaag tctcctaata 661 ggaaggagca tttaaaagtg gtggtaatgt cagcaactat ggaattagcc aagctctctg 721 cattctttgg aaattgtcca atatttgata tacctggaag gctttatcca gtcagagaga 781 aattctgcaa tttgattggt ccacgagaca gagaaaatac tgcgtatatt caagcgattg 841 tgaaagtcac catggatatc catttgaatg aaatggctgg agacatcttg gtttttctga 901 ctggccagtt tgaaatagaa aaaagttgtg agttactttt tcagatggca gagtctgttg 961 attatgatta tgatgttcaa gataccaccc tcgatggctt gttaatattg ccgtgttatg 1021 gatcaatgac aacagatcaa cagaggagga tatttttgcc accaccacct ggaattagaa 1081 aatgtgtcat atccaccaat atttctgcaa cgtctttgac aatagatgga atcagatatg 1141 tggtagatgg tggcttcgtg aagcagttaa atcacaaccc cagattaggg ttggacatcc 1201 tggaggtggt tccaatttca aagagcgagg cattacagcg aagtggccga gctggcagga 1261 cttcttcagg aaaatgcttt cggatctata gtaaagattt ttggaaccag tgtatgcctg 1321 accatgtgat ccctgaaatt aagagaacta gtttgacatc tgtagttctg accttaaagt 1381 gccttgccat acacgatgtc ataaggtttc cctatttgga tccacctaat gagagactta 1441 ttttagaagc tcttaaacaa ctttaccagt gtgatgctat tgacaggagt ggccatgtca 1501 ccagattggg tttgtctatg gtggagtttc ctttgcctcc acatctgaca tgtgcagtaa 1561 taaaagctgc ttccctggat tgtgaagatc tactacttcc aatagcagca atgttgtctg 1621 tggaaaacgt cttcattaga cctgttgatc cagagtacca gaaggaagca gaacagagac 1681 atcgagaatt ggcagctaaa gctggaggat ttaatgactt tgcaacttta gctgtcatct 1741 ttgaacaatg caaatcaagt ggagctccag cttcatggtg ccaaaaacac tggattcatt 1801 ggaggtgctt attttctgca tttcgtgtgg aagctcaact tcgagaacta atcaggaagc 1861 ttaaacagca aagtgatttc ccaaaagaga cctttgaagg ccctaaacat gaagtactac 1921 gaagatgtct ttgtgcgggc tatttcaaaa atgtagctcg aagatctgtt gggagaacgt 1981 tttgcacaat ggatggtcgt ggaagcccag ttcacattca tccttcctca gcacttcatg 2041 aacaggaaac caaacttgaa tggatcattt ttcatgaggt attggttacc accaaagtct 2101 acgcaagaat tgtatgccca atccgttatg aatgggtaag agacttgtta cccaagttgc 2161 atgaatttaa tgcacatgat ttgagcagtg tggcccgacg tgaagtgaga gaagatgcaa 2221 gaaggagatg gacaaataag gaaaatgtaa agcagctaaa ggatggaata tcgaaagacg 2281 tcttaaagaa aatgcaaaga agaaatgatg acaaatccat atctgatgca cgggctcgtt 2341 tccttgagag aaagcagcag aggacccagg accacagtga cacacgaaag gaaacaggct 2401 aaggtggtga accctccaat tcaggaagtg ggaaaaggag ccaggaaatg tgcttctact 2461 ttgccagtta tttcagacag cactaccaag aggaggtggt cagcacttgt tattggccta 2521 tgaactaaaa gcaaatcaaa gctcataaat caaagctcat cagttcccat aaatgcagtt 2581 gtcaaagaaa agatttggtt gccatagtca taagcaatga tacatgaaac caatgaaaga 2641 cagtacatgt aataatattt tcctcagtac aattttgctg gccttaactg gtatcaaacg 2701 ctgtcattga gatgttttca aagaacattg agttgtattt aatcagcgtg tactccattt 2761 gcattgaagc attaaaaatt atttttctta aaatctcttt aaggccttct tgttgctgtt 2821 agaatagtgc tatatatcag gtatgtgacc atttatttca gaaggctgaa cataagaggt 2881 ttctactcag caatacttag atgtctaact gtttaattgc tacagagctt tatagatatt 2941 tagagaaaag acttaatcaa ttagtaaata aaattgccta tggcaggatt ctttcttgaa 3001 ttaatattaa tccttaaatt gatttttctg ggattataca aattcctttt tatataaaag 3061 tatattgttt aaaacagtag ctatagccat taaccaaagg acagatgata tatatatata 3121 tgatatatat gtatatataa gttctttttt agctgtacct acgtacttat atcagcacca 3181 tgtatgtagg tgtgatagta ctttcaaaca gcgcctccac ctggcctact ctgttatttc 3241 cacctgtttg ggtagggcca tttaacttcc attatgccaa acttgggatg ggattttcga 3301 agcagacaac actatttcat cgtgtttcaa attggaacct tgaggctagt tagtatcaca 3361 ctcaggccac actcagcact tgcccactct tgtttactgc cttgtattct agttatttgt 3421 gtatttgtct ccctcactag attatacgct ccttgtgggc agggactgtg tcttttttca 3481 tctttgtatc tttcatgcac ctagcatagt gctttgcaca tagtagtcac tcagtgtttg 3541 ttaaataaag ctattagtgt cattaaaatt caaaaaaaaa aaaaaaa //