LOCUS BC024154 3181 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class VI, type 11A, mRNA (cDNA clone
IMAGE:3928684), partial cds.
ACCESSION BC024154
VERSION BC024154.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3181)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3181)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC024154.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: c Column: 13.
FEATURES Location/Qualifiers
source 1..3181
/db_xref="H-InvDB:HIT000090878"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3928684"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3181
/gene="ATP11A"
/gene_synonym="ATPIH"
/gene_synonym="ATPIS"
/db_xref="GeneID:23250"
/db_xref="HGNC:HGNC:13552"
/db_xref="MIM:605868"
CDS <1..2807
/gene="ATP11A"
/gene_synonym="ATPIH"
/gene_synonym="ATPIS"
/codon_start=3
/product="ATP11A protein"
/protein_id="AAH24154.1"
/db_xref="GeneID:23250"
/db_xref="HGNC:HGNC:13552"
/db_xref="MIM:605868"
/translation="YVGHREPPPGAEAYIPQRYPDNRIVSSKYTFWNFIPKNLFEQFR
RVANFYFLIIFLVQLIIDTPTSPVTSGLPLFFVITVTAIKQGYEDWLRHKADNAMNQC
PVHFIQHGKLVRKQSRKLRVGDIVMVKEDETFPCDLIFLSSNRGDGTCHVTTASLDGE
SSHKTHYAVQDTKGFHTEEDIGGLHATIECEQPQPDLYKFVGRINVYSDLNDPVVRPL
GSENLLLRGATLKNTEKIFGVAIYTGMETKMALNYQSKSQKRSAVEKSMNAFLIVYLC
ILISKALINTVLKYVWQSEPFRDEPWYNQKTESERQRNLFLKAFTDFLAFMVLFNYII
PVSMYVTVEMQKFLGSYFITWDEDMFDEETGEGPLVNTSDLNEELGQVEYIFTDKTGT
LTENNMEFKECCIEGHVYVPHVICNGQVLPESSGIDMIDSSPSVNGREREELFFRALC
LCHTVQVKDDDSVDGPRKSPDGGKSCVYISSSPDEVALVEGVQRLGFTYLRLKDNYME
ILNRENHIERFELLEILSFDSVRRRMSVIVKSATGEIYLFCKGADSSIFPRVIEGKVD
QIRARVERNAVEGLRTLCVAYKRLIQEEYEGICKLLQAAKVALQDREKKLAEAYEQIE
KDLTLLGATAVEDRLQEKAADTIEALQKAGIKVWVLTGDKMETAAATCYACKLFRRNT
QLLELTTKRIEEQSLHDVLFELSKTVLRHSGSLTRDNLSGLSADMQDYGLIIDGAALS
LIMKPREDGSSGNYRELFLEICRSCSAVLCCRMAPLQKAQIVKLIKFSKEHPITLAIG
DGANDVSMILEAHVGIGVIGKEGRQAARNSDYAIPKFKHLKKMLLVHGHFYYIRISEL
VQYFFYKNVCFIFPQFLYQFFCGFSQQTLYDTAYLTLYNISFTSLPILLYSLMEQHVG
IDVLKRDPTLYRYHPPNSLS"
BASE COUNT 852 a 782 c 818 g 729 t
ORIGIN
1 tctacgtggg acacagggag ccacctccgg gcgcagaggc ctacatccca cagagatacc
61 cagacaacag gatcgtctcg tccaagtaca cattttggaa ctttataccc aagaatttat
121 ttgaacaatt cagaagagta gccaactttt atttccttat catatttctg gtgcagttga
181 ttattgatac acccacaagt ccagtgacaa gcggacttcc actcttcttt gtcattactg
241 tgacggctat caaacagggt tatgaagact ggcttcgaca taaagcagac aatgccatga
301 accagtgtcc tgttcatttc attcagcacg gcaagctcgt tcggaaacaa agtcgaaagc
361 tgcgagttgg ggacattgtc atggttaagg aggacgagac ctttccctgc gacttgatct
421 tcctttccag caaccgggga gatgggacgt gccacgtcac caccgccagc ttggatggag
481 aatccagcca taaaacgcat tacgcggtcc aggacaccaa aggcttccac acagaggagg
541 atatcggcgg acttcacgcc accatcgagt gtgagcagcc ccagcccgac ctctacaagt
601 tcgtgggtcg catcaacgtt tacagtgacc tgaatgaccc cgtggtgagg cccttaggat
661 cggaaaacct gctgcttaga ggagctacac tgaagaacac tgagaaaatc tttggtgtgg
721 ctatttacac gggaatggaa accaagatgg cattaaatta tcaatcaaaa tctcagaagc
781 gatctgccgt ggaaaaatcg atgaatgcgt tcctcattgt gtatctctgc attctgatca
841 gcaaagccct gataaacact gtgctaaaat acgtgtggca gagtgagccc tttcgggatg
901 agccgtggta taatcagaaa acggagtcgg aaaggcagag gaatctgttc ctcaaggcat
961 tcacggactt cctggccttc atggtcctct ttaactacat catccctgtg tccatgtacg
1021 tcacggtcga gatgcagaag ttcctcggct cttacttcat cacctgggac gaagacatgt
1081 ttgacgagga gactggcgag gggcctctgg tgaacacgtc ggacctcaat gaagagctgg
1141 gacaggtgga gtacatcttc acagacaaga ccggcaccct cacggaaaac aacatggagt
1201 tcaaggagtg ctgcatcgaa ggccatgtct acgtgcccca cgtcatctgc aacgggcagg
1261 tcctcccaga gtcgtcagga atcgacatga ttgactcgtc ccccagcgtc aacgggaggg
1321 agcgcgagga gctgtttttc cgggccctct gtctctgcca caccgtccag gtgaaagacg
1381 atgacagcgt agacggcccc aggaaatcgc cggacggggg gaaatcctgt gtgtacatct
1441 catcctcgcc cgacgaggtg gcgctggtcg aaggtgtcca gagacttggc tttacctacc
1501 taaggctgaa ggacaattac atggagatat taaacaggga gaaccacatc gaaaggtttg
1561 aattgctgga aattttgagt tttgactcag tcagaaggag aatgagtgta attgtaaaat
1621 ctgctacagg agaaatttat ctgttttgca aaggagcaga ttcttcgata ttcccccgag
1681 tgatagaagg caaagttgac cagatccgag ccagagtgga gcgtaacgca gtggaggggc
1741 tccgaacttt gtgtgttgct tataaaaggc tgatccaaga agaatatgaa ggcatttgta
1801 agctgctgca ggctgccaaa gtggcccttc aagatcgaga gaaaaagtta gcagaagcct
1861 atgagcaaat agagaaagat cttactctgc ttggtgctac agctgttgag gaccggctgc
1921 aggagaaagc tgcagacacc atcgaggccc tgcagaaggc cgggatcaaa gtctgggttc
1981 tcacgggaga caagatggag acggccgcgg ccacgtgcta cgcctgcaag ctcttccgca
2041 ggaacacgca gctgctggag ctgaccacca agaggatcga ggagcagagc ctgcacgacg
2101 tcctgttcga gctgagcaag acggtcctgc gccacagcgg gagcctgacc agagacaacc
2161 tctccggact ttcagcagat atgcaggact acggtttaat tatcgacgga gctgcactgt
2221 ctctgataat gaagcctcga gaagacggga gttccggcaa ctacagggag ctcttcctgg
2281 aaatctgccg gagctgcagc gcggtgctct gctgccgcat ggcgcccttg cagaaggctc
2341 agattgttaa attaatcaaa ttttcaaaag agcacccaat cacgttagca attggcgatg
2401 gtgcaaatga tgtcagcatg attctggaag cgcacgtggg cataggtgtc atcggcaagg
2461 aaggccgcca ggctgccagg aacagcgact atgcaatccc aaagtttaag catttgaaga
2521 agatgctgct tgttcacggg catttttatt acattaggat ctctgagctc gtgcagtact
2581 tcttctataa gaacgtctgc ttcatcttcc ctcagttttt ataccagttc ttctgtgggt
2641 tttcacaaca gactttgtac gacaccgcgt atctgaccct ctacaacatc agcttcacct
2701 ccctccccat cctcctgtac agcctcatgg agcagcatgt tggcattgac gtgctcaaga
2761 gagacccgac cctgtacagg taccatcctc caaacagcct ctcctgagag cagagagagt
2821 aactaggcag cactctggca gttccttcca atagccacct ggcagacctc agttgagggc
2881 cagaagcatt cggcatctgc tgatattctt gcttgatcag gagcttgttt aaactggaag
2941 caacatagct caaatggaga ttcttcaagt cttgctggat ggtttatgct gcatttggaa
3001 catctgtgtg gagccagttt gcactttcct gtgctttctg acagtcctga gggagctggg
3061 gtacaagcgt cttcctcgtt gtgaccctag ggaatctgtg gcctaagtta tcctttaaaa
3121 ccatgtgtgt tccatacagt gagaaaaaac aaaaattaac agcaaaaaaa aaaaaaaaaa
3181 a
//