LOCUS BC024152 2625 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens teashirt zinc finger homeobox 1, mRNA (cDNA clone
IMAGE:3844124), partial cds.
ACCESSION BC024152
VERSION BC024152.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2625)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2625)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (19-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC024152.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: b Column: 22.
FEATURES Location/Qualifiers
source 1..2625
/db_xref="H-InvDB:HIT000039740"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3844124"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2625
/gene="TSHZ1"
/gene_synonym="NY-CO-33"
/gene_synonym="TSH1"
/db_xref="GeneID:10194"
/db_xref="HGNC:HGNC:10669"
CDS <1..2170
/gene="TSHZ1"
/gene_synonym="NY-CO-33"
/gene_synonym="TSH1"
/codon_start=2
/product="TSHZ1 protein"
/protein_id="AAH24152.2"
/db_xref="GeneID:10194"
/db_xref="HGNC:HGNC:10669"
/translation="LQDLAPPCSPEPAGMAAEVALSESAKDQKAANPYVTPNNRYGYQ
NGASYTWQFEARKAQILKCMECGSSHDTLQQLTAHMMVTGHFLKVTTSASKKGKQLVL
DPVVEEKIQSIPLPPTTHTRLPASSIKKQPDSPAGSTTSEEKKEPEKEKPPVAGDAEK
IKEESEDSLEKFEPSTLYPYLREEDLDDSPKGGLDILKSLENTVSTAISKAQNGAPSW
GGYPSIHAAYQLPGTVKPLPAAVQSVQVQPSYAGGVKSLSSAEHNALLHSPGSLTPPP
HKSNVSAMEELVEKVTGKVNIKKEERPPEKEKSSLAKAASPIAKENKDFPKTEEVSGK
PQKKGPEAETGKAKKEGPLDVHTPNGTEPLKAKVTNGCNNLGIIMDHSPEPSFINPLS
ALQSIMNTHLGKVSKPVSPSLDPLAMLYKISNSMLDKPVYPATPVKQADAIDRYYYEN
SDQPIDLTKSKNKPLVSSVADSVASPLRESALMDISDMVKNLTGRLTPKSSTPSTVSE
KSDADGSSFEEALDELSPVHKRKGRQSNWNPQHLLILQAQFASSLRETTEGKYIMSDL
GPQERVHISKFTGLSMTTISHWLANVKYQLRRTGGTKFLKNLDTGHPVFFCNDCASQF
RTASTYISHLETHLGFSLKDLSKLPLNQIQEQQNVSKVLTNKTLGPLGATEEDLGSTF
QCKLCNRTFASKHAVKLHLSKTHGKSPEDHLIYVTELEKQ"
BASE COUNT 687 a 755 c 687 g 496 t
ORIGIN
1 gcttcaggac ctggcgcccc cctgctcccc tgagccagca ggaatggccg cagaggtggc
61 cctgagtgag tcagccaagg atcagaaagc agcgaacccg tacgtcacgc ccaataaccg
121 ctatggctac cagaatggcg ccagctacac ctggcagttt gaggcccgca aggcgcagat
181 cctcaagtgc atggagtgtg gcagctccca cgacacgctg cagcagctca ccgcccacat
241 gatggtcacc gggcacttcc tgaaagtgac cacctcggct tctaagaagg gcaagcagtt
301 ggtgctggac cctgtggtgg aagagaagat ccagtccatc ccactaccgc ccaccaccca
361 cacgcggctg ccggcctcca gcatcaaaaa gcagcccgac tctcccgcgg ggtccacgac
421 ttctgaagaa aagaaagagc cagagaagga gaagccgcct gtggctggcg acgcggagaa
481 gatcaaggag gagagtgagg acagcttgga gaaatttgag cccagcaccc tgtacccgta
541 cctgcgtgag gaggacctgg acgacagccc caagggaggg ctggacattc tcaagtccct
601 ggagaatacc gtctccacgg ccattagcaa agctcagaat ggtgcgccct catggggtgg
661 ctaccccagc atccatgcag cctaccagct cccgggcacc gtgaagccac tgccggcggc
721 cgtgcagagc gtgcaggtgc agccgtccta tgctggcggc gtgaagtcgc tgtcttccgc
781 cgagcacaac gccctcctgc actccccagg gagcctcacg cccccaccgc acaagagcaa
841 cgtgtctgcc atggaggagc tggtggagaa ggtcacgggc aaggtcaaca tcaagaagga
901 ggagagaccc cctgagaagg agaagagctc cctggccaag gctgcgtccc ccatagcaaa
961 agagaataaa gatttcccga aaacggagga agtcagcggc aaaccacaga agaagggccc
1021 tgaggccgag actgggaagg ccaaaaagga gggaccgctg gacgttcaca ccccaaatgg
1081 cacagagcct ctcaaagcaa aggtcaccaa cggctgtaac aacctgggga tcatcatgga
1141 ccactcaccg gagccttcct tcatcaaccc gctgagcgct ttgcagtcca tcatgaacac
1201 ccacctgggc aaggtgtcca agcccgtgag tccctcgctg gacccgctgg cgatgctgta
1261 caagatcagc aacagcatgc tggacaagcc ggtgtacccc gccacccctg tgaagcaggc
1321 cgatgccatc gaccgctact attatgaaaa cagcgaccag cccattgact taaccaagtc
1381 caagaacaag ccgctggtgt ccagcgtggc tgattcggtg gcatcacctc tgcgggagag
1441 cgcactcatg gacatctccg acatggtgaa aaacctcaca ggccgcctga cgcccaagtc
1501 ctccacgccc tccacagttt cagagaagtc cgatgctgat ggcagcagct ttgaggaggc
1561 gttggacgag ctgtcaccgg tccacaagag gaagggccgg cagtccaact ggaacccgca
1621 gcaccttctc atcctgcagg cccagttcgc ctcgagcttg cgggagacca cagagggcaa
1681 gtacatcatg tcggacttgg gcccgcagga gagggtgcac atctcgaagt ttactgggct
1741 ctccatgacc accatcagcc actggctggc caatgtgaag taccagttga ggaggacagg
1801 gggaacgaaa ttcctaaaga acctggacac agggcatcct gttttctttt gcaacgattg
1861 tgcctctcag ttcagaactg cttctacata cataagtcat ttggagacac acttgggctt
1921 cagcctgaag gatctctcca agctgccact caatcagatt caagaacagc agaatgtttc
1981 gaaagtcctc accaacaaaa ctctgggccc actgggggcc accgaggaag acttgggctc
2041 cacattccaa tgtaagctct gcaaccggac ttttgcgagc aagcacgcag tcaaactgca
2101 ccttagtaag acccacggca agtctcccga ggaccacctg atctatgtga ctgagttgga
2161 gaaacagtag cgtccaggta tgcaagagac cgcggaacat tgcactaaac gtcgtcgagc
2221 tgcactaggc ctggcctgag cctctgaaat cagtctttcc tttgttgctg gcccgcctct
2281 ctggaccttg gttttcttac acatattttg tatatttata tgctctctgt ccgatctgtg
2341 catgttattt ttctttttcc gtgagtcaaa gtctgacctt tattttcaac atctgttctt
2401 ggtgttaagc tatcttttgt aggaaatagt ggggcacact actcagagac attatttagc
2461 agtaaagaaa gacacaaata acaatgataa aaagacatcc taaaatggtg aagttgccat
2521 gacaataaag gtcatagaac ctggtagtgt caaatttaac cctttgagga ctgtaattgc
2581 atttctgtgc ctttcacttg aaaaaaaaaa aaaaaaaaaa aaaaa
//