LOCUS BC024039 3494 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens tripartite motif-containing 26, mRNA (cDNA clone MGC:12710 IMAGE:3954669), complete cds. ACCESSION BC024039 VERSION BC024039.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3494) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3494) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 18 Row: m Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 60279912. FEATURES Location/Qualifiers source 1..3494 /db_xref="H-InvDB:HIT000050878_06" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12710 IMAGE:3954669" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..3494 /gene="TRIM26" /gene_synonym="AFP" /gene_synonym="RNF95" /db_xref="GeneID:7726" /db_xref="HGNC:HGNC:12962" /db_xref="MIM:600830" CDS 420..2039 /gene="TRIM26" /gene_synonym="AFP" /gene_synonym="RNF95" /codon_start=1 /product="tripartite motif-containing 26" /protein_id="AAH24039.1" /db_xref="GeneID:7726" /db_xref="HGNC:HGNC:12962" /db_xref="MIM:600830" /translation="MATSAPLRSLEEEVTCSICLDYLRDPVTIDCGHVFCRSCTTDVR PISGSRPVCPLCKKPFKKENIRPVWQLASLVENIERLKVDKGRQPGEVTREQQDAKLC ERHREKLHYYCEDDGKLLCVMCRESREHRPHTAVLMEKAAQPHREKILNHLSTLRRDR DKIQGFQAKGEADILAALKKLQDQRQYIVAEFEQGHQFLREREEHLLEQLAKLEQELT EGREKFKSRGVGELARLALVISELEGKAQQPAAELMQDTRDFLNRYPRKKFWVGKPIA RVVKKKTGEFSDKLLSLQRGLREFQGKLLRDLEYKTVSVTLDPQSASGYLQLSEDWKC VTYTSLYKSAYLHPQQFDCEPGVLGSKGFTWGKVYWEVEVEREGWSEDEEEGDEEEEG EEEEEEEEAGYGDGYDDWETDEDEESLGDEEEEEEEEEEEVLESCMVGVARDSVKRKG DLSLRPEDGVWALRLSSSGIWANTSPEAELFPALRPRRVGIALDYEGGTVTFTNAESQ ELIYTFTATFTRRLVPFLWLKWPGTRLLLRP" BASE COUNT 844 a 945 c 991 g 714 t ORIGIN 1 aggaggggtg ccggccggga ttcgcggccc ggagctcggg accggagtca ggaatggaga 61 gaagggtaat ggttttacct cttattgtgg aaacctgttg agatcacaga gaatatactg 121 acggcataaa agggcagaac catagcaggg tgcggttgct tcattccagc ctcgcagtca 181 cctctgtgcc ctgctggttg tcttcccagc gctgctgtag ttgccttcca tggatctata 241 ggagagcaag tcctccagga gctggtggtg tctgtcgatt gactgagtgc tggagctggc 301 agccctgtgc aggctgccac ctttgcccct ttactgtgct tgctcctgac tctatgtcgc 361 gtctccaagg agaagaagtc ctcaccagtg aacggagacc tctctgaact aaggatacca 421 tggccacgtc agccccacta cggagcctgg aagaggaggt gacctgctcc atctgtcttg 481 attacctgcg ggaccctgtg accattgact gtggccacgt cttctgccgc agctgcacca 541 cagacgtccg ccccatctca gggagccgcc ccgtctgccc actctgcaag aagcctttta 601 agaaggagaa catccgaccc gtgtggcaac tggccagcct ggtggagaac attgagcggc 661 tgaaggtgga caagggcagg cagccgggag aggtgacccg ggagcagcag gatgcaaagt 721 tgtgcgagcg acaccgagag aagctgcact actactgtga ggacgacggg aagctgctgt 781 gcgtgatgtg ccgggagtcc cgggagcaca ggccccacac ggccgtcctc atggagaagg 841 ccgcccagcc ccacagggaa aaaatcctga accacctgag taccctaagg agggacagag 901 acaaaattca gggcttccag gcaaagggag aagctgatat cctggccgcg ctgaagaagc 961 tccaggacca gaggcagtac attgtggctg agtttgagca gggtcatcag ttcctgaggg 1021 agcgggagga acacctgctg gaacagctgg cgaagctgga gcaggagctc acggagggca 1081 gggagaagtt caagagccgg ggcgtcgggg agcttgcccg gctggccctg gtcatctccg 1141 aactggaggg caaggcgcag cagccagctg cagagctcat gcaggacacg agagacttcc 1201 taaacaggta tccacggaag aagttctggg ttgggaaacc cattgctcga gtggttaaaa 1261 aaaagaccgg agaattctca gataaactcc tctctctgca acgaggcctg agggaattcc 1321 aggggaagct gctgagagac ttggaatata agacagtgag cgtcaccctg gacccacagt 1381 cggccagtgg gtacctgcag ctgtcagagg actggaagtg cgtgacctac accagcctgt 1441 acaagagtgc ctacctgcac ccccagcagt ttgactgtga gcctggggtg ctaggcagca 1501 agggcttcac ctggggcaag gtctactggg aagtggaagt ggagagggag ggctggtctg 1561 aggatgaaga agagggggat gaggaggaag agggagaaga ggaggaggag gaagaggagg 1621 ccggctatgg ggatggatat gacgactggg aaacggacga agatgaggaa tcgttgggcg 1681 atgaagagga agaagaggag gaggaagagg aggaagttct ggaaagctgc atggtggggg 1741 tggctagaga ctctgtgaag aggaagggag acctctccct gcggccagag gatggcgtgt 1801 gggcgctgcg cctctcctcc tccggcatct gggccaacac cagccccgag gctgagcttt 1861 tcccagcact gcggccccgg agagtgggca tcgccctgga ttatgaaggg ggcaccgtga 1921 ctttcaccaa cgcagagtca caggaactca tctacacctt cactgccacc ttcacccggc 1981 gcctggtccc cttcctgtgg ctcaagtggc caggaacacg cctcctgcta agaccctgag 2041 ccctgacatc tgcccccagc cccaaccctc agatgcttca cttctttgga attccaggac 2101 tctcaatggg gggacgggat gcctggccta agcacctgga gcaggggacc ccatatccac 2161 tggtagccac ctccccattg ctgtggcccc ctgaaatctc actcagtgct gttgctccat 2221 ctactgccct aatggggctc ttttcccacc tcctgctggt ttcccgaggg aacttctgac 2281 cctggagtcc atgagggctc ctttcctttt tgaccacgac cttggcccca gctctgcact 2341 ctctggaata agggcccgat gcagcatttt cttgcccagt gtggcaagac ctcagaaaaa 2401 ccagtcaatt acgcctaaga tcattttgct gtccttaaac cccccaggtt ccttcttgca 2461 caaatccact ctgctgccca ccttccctgg cattttaaac agacctaccc caccccaact 2521 cagagttaag catacatggc aatgctgaaa ataaacaaaa tccactgagg cttcccaggc 2581 catttaaagc ctggagtacc agcgcatatc atctcatggg gtccagagtg gagtccaggc 2641 ttctctgaaa ccagggctga gcatatttcc atagccaagg aggtgggact ccctggagct 2701 atctgtggtc ttagggaagg atccagacat acacggcttt ggggtacaag ctgtgatcac 2761 tgatcaataa attatctcta gattggtcct tgtgagggga gttttaagaa tccagaacat 2821 cttgctcttg atcagcacat ccaaaaacac caagacaaac atccagtgga gcagaacctc 2881 tcctgcctcg ggagttctga ccgggttccc cagcagggtg ttaagcctct gtctctggcc 2941 ctaccagcat ccaggttcca ctttcctagg agagagtgga gatgggaaga cagggaaagg 3001 aaggcagcag gaggccacaa gcccaccagg tcttcatgtc aagagaggga gtaacatgtc 3061 ttctcattgc ccacggaccc aacctctgtc caggtgcccc tcatcatcac agtttaacac 3121 aagctcccct gctccagcca aattgatctc ccagtcttgt ccttacccat tccaagtgct 3181 ctgccagccc ctgttcatcc aagttttaag tcctccaccc tgttctaaga gactgttcca 3241 acggctctgg gcctcagtgg tcacttgacc accattgtct cagagctgcc cactttgtgt 3301 gtgtcacatg ctgcctgagt cacatgtaca tcttatttct gcctctagtt ttgtaagctc 3361 ctggagggcg gataacatct tatactactc ttgtattctc atggcaccta gtgcagtgct 3421 gggcacagag taggtgctca ataaagactt gttgaatgaa aaaaaaaaaa acaaaaaaaa 3481 aaaaaaaaaa aaaa //