LOCUS BC024011 3719 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens neuroblastoma breakpoint family, member 3, mRNA (cDNA
clone MGC:26742 IMAGE:4827023), complete cds.
ACCESSION BC024011
VERSION BC024011.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3719)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3719)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC024011.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: p Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48093066.
FEATURES Location/Qualifiers
source 1..3719
/db_xref="H-InvDB:HIT000039722_03"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26742 IMAGE:4827023"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3719
/gene="NBPF3"
/gene_synonym="AE2"
/gene_synonym="DKFZp434D177"
/gene_synonym="RP11-293F5.5"
/db_xref="GeneID:84224"
/db_xref="HGNC:HGNC:25076"
/db_xref="IMGT/GENE-DB:25076"
/db_xref="MIM:25076"
CDS 327..1343
/gene="NBPF3"
/gene_synonym="AE2"
/gene_synonym="DKFZp434D177"
/gene_synonym="RP11-293F5.5"
/codon_start=1
/product="NBPF3 protein"
/protein_id="AAH24011.1"
/db_xref="GeneID:84224"
/db_xref="HGNC:HGNC:25076"
/db_xref="IMGT/GENE-DB:25076"
/db_xref="MIM:25076"
/translation="MPLTPTVQGFQWTLRGPDVETSPFGAPRAASHGVGRHQELRDPT
VPGPTSSATNVSMVVSAGPWSGEKAEMNILEINKKSRPQLAENKQQFRNLKQKCLVTQ
VAYFLANRQNNCDYEDCKDLIKSMLRDERLLTEEKLAEELGQAEELRQYKVLVHSQER
ELTQLREKLQEGRDASRSLNQHLQALLTPDEPDNSQGRDLREQLAEGCRLAQHLVQKL
SPENDDDEDEDVKVEEAEKVQELYAPREVQKAEERKSLRTHWRSMPSLVQIATTLVSP
TSLTGTPESHLRKTKSTQLSLTHPLMMNGWMLYALSQKMKVIMSKRKKKGQCLPDHLE
GFVV"
BASE COUNT 997 a 871 c 925 g 926 t
ORIGIN
1 gggacagccg cggtactggg atgggtaggt gaggatcccg agactgagtg agcttctgcg
61 cgcggtgctt ttgggaacgc gggactggca acctgcggcg ccaggagctg ggccgaggcg
121 cggcggcgcg gctgcgggcc gccgtctgga tgggaagtta cggcgaagtc cacccagcgt
181 ttctcagaca atctgaaggc aaatcctgtt tagacccagg cgaaggttcc tggtgaccca
241 ggctctcacc agccaattgt cccttgccgt cctcctgagg gtatctggag cttcagtgct
301 gtgtgctctt ggcctccaca ctggggatgc cactgactcc cactgtccag ggcttccagt
361 ggactctccg aggccctgat gtagaaactt ccccattcgg tgcaccaaga gcagcctcac
421 atggtgtggg ccgacatcaa gagctgcgag atccaacagt ccctggcccc acctcttctg
481 ccacaaacgt cagcatggtg gtatctgccg gcccttggtc cggtgagaag gcagagatga
541 acattctaga aatcaacaag aaatcgcgcc cccagctggc agagaacaaa cagcagttca
601 gaaacctcaa acagaaatgt cttgtaactc aagtggccta cttcctggcc aaccggcaaa
661 ataattgcga ctatgaagac tgcaaagacc tcataaaatc tatgctgagg gatgagcggc
721 tgctcacaga agagaagctt gcagaggagc tcgggcaagc tgaggagctc aggcaatata
781 aagtcctggt tcactctcag gaacgagagc tgacccagtt aagggagaag ttacaggaag
841 ggagagatgc ctcccgctca ttgaatcagc atctccaggc cctcctcact ccggatgagc
901 cggacaactc ccagggacgg gacctccgag aacagctggc tgagggatgt aggctggcac
961 agcacctcgt ccaaaagctc agcccagaaa atgatgacga tgaggatgaa gatgttaaag
1021 ttgaggaggc tgagaaagta caggaattat atgcccccag ggaggtgcag aaggctgaag
1081 aaaggaagtc cctgaggact cactggagga gtatgccatc acttgttcaa atagccacca
1141 cccttgtgag tccaaccagc cttacgggaa caccagaatc acatttgagg aagaccaagt
1201 cgactcaact ctcattgact catcctctca tgatgaatgg ttggatgctg tatgcattat
1261 cccagaaaat gaaagtgatc atgagcaaga ggaagaaaaa gggccagtgt ctcccagatc
1321 atctggaagg ttttgttgtc taatctctgt tggttatatc ttctgtcatc cctgtcctgc
1381 ctggctcatc aggaatctgc aggagtctga agaggaggaa gccccccagg agtcctggga
1441 tgaaggacat tggtgtgatc aagtgaaaaa ggaggaccaa gaggccacaa gtcccaggct
1501 cagcagggag ctgctggatg agaaagagcc tgaagtcttg caggactcac tggatagatt
1561 ttattcaact ccctgtgggt acctggaact gcctgactta tgccagccct acagaagtga
1621 gttttactca ttgcaggaac aacaccttgg cttggctctt gacgtggaca gaatgaaaaa
1681 ggaccaagaa gaggaagaag accaaggccc accatgcccc aggctcagca gagagctgcc
1741 ggaggtagta gagcctgagg acttgcagga ctcactggat agatggtatt caactccttt
1801 cagttatcca gaactgcctg attcatgcca gccctacggc agttgctttt actcactgga
1861 ggaagaacac gttggctttt ctcttgacgt ggatgaaatt gaaaagtacc aagaagggga
1921 agaagatcaa aacccaccat gccccaggct caacgaggtg ctgatggaag cagaagagcc
1981 tgaagtcttg caggactcac tggatagatg ttattcgact acttcaactt actttcaact
2041 acatgcctca ttccagcagt acagaagtgc cttttactca tttgaggaac aggacgtcag
2101 cttggccctt gacgtggaca ataggttttt tactttgaca gtgataaggc accacctggc
2161 cttccagatg ggagtcatat tcccacacta agcagccctt actaagctga gagatgtcat
2221 tgctgcaggc aggacctata ggcacatgta ggtttgaatg aaactgtagt tccctttgga
2281 agcccagtca taggatggga aagtgggcat ggctctattc ctattctcag accttgccag
2341 tggccacctg tgctcagtct gaagacattg gacccaagtt aggtgtgaca cgttcacacg
2401 actatgtagc acatgccggg agtgatctgc cagacattct aatttgaacc agatatctct
2461 gggtagctac aaagttcctc aggggtttca ttttgcaggc atgtctctga gctgctatac
2521 ctgctcaagg tcagtgtcat ctttgtgttt agctcatcca aaggtgttac cctggtttca
2581 ttgaacctaa ccccattctt tgtatcttca gtgttggttt gttttagctg atccatctgt
2641 aacacaggag ggatccttgg ctgaggattg tatttcagaa ccactgactg ctcttgacag
2701 ttgttaaccc actaggctcc tttgagtaga gaagccatag tccttcagcc tccaattgat
2761 atcaatactt aggaagacca cagctagacg gacaaacagc attgggaggc cttagtcctg
2821 ctcctttcaa ttccatcctg taaagaacag gagtcaggag ccgctggcaa gagacagcat
2881 gtcacccggg actctgctgg tgcagaatat gaacaatgcc atgttcttgc agaaaacgct
2941 tagcctgagt ttcataggag gtaatcacca gacaactgca gaatgtagaa cactgagcag
3001 gacaactgac ctgtctcctt cacacagtcc acgtcaccac gaatcacaca acaaaaagga
3061 ggagagatat tttgggttca gaagaagtaa atgataatgt agctacattt ctttagttat
3121 tttgaacccc aaatatttcc tcatcttttt gttgttgtca ttgattgtgg tgacatggac
3181 ttgtttgtag aggacaggtc agctgtctgg ctcaatggtc tacattctga agttgtctga
3241 aaatgtcttc atgattaaat tcagcctaaa cgtttcatca agaacactac agagtcgata
3301 ctgtgagttt ccaacctcag cccatctgtg ggcagagaag gtctagtttg tccatcagca
3361 ttatcatgat atcaggactg gttacttggt taaggagggg tctaggagat ctgtcccttt
3421 tagagacacc ttacttatga tgaagtattt gggagagtgg tttttaaaag tagaaatgtc
3481 ctgtattcca gtgatcatcc tgtaaacatt ttatcattta ttaatcatcc ctgcctgtgt
3541 ctattattat attcatatct ctacgctgga aactttctgc ctcaatgttt actgtgcctt
3601 tgtttttgct agtgtgtgtt gttgaaaaaa aaacattctc tgcctgagtt ttaatttttg
3661 tccaaagtta ttttaatcta tacaattaaa aacttttgcc taccaaaaaa aaaaaaaaa
//