LOCUS BC024000 2840 bp mRNA linear HUM 28-JUL-2005
DEFINITION Homo sapiens zinc finger protein 638, mRNA (cDNA clone
IMAGE:4824896), complete cds.
ACCESSION BC024000
VERSION BC024000.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2840)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2840)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: j Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21626467
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2840
/db_xref="H-InvDB:HIT000039715"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4824896"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..2840
/gene="ZNF638"
/gene_synonym="MGC26130"
/gene_synonym="NP220"
/gene_synonym="Zfp638"
/db_xref="GeneID:27332"
CDS 283..2727
/gene="ZNF638"
/gene_synonym="MGC26130"
/gene_synonym="NP220"
/gene_synonym="Zfp638"
/codon_start=1
/product="ZNF638 protein"
/protein_id="AAH24000.1"
/db_xref="GeneID:27332"
/translation="MSRPRFNPRGDFPLQRPRAPNPSGMRPPGPFMRPGSMGLPRFYP
AGRARGIPHRFAGHESYQNMGPQRMNVQVTQHRTDPRLTKEKLDFHEAQQKKGKPHGS
RWDDEPHISASVAVKQSSVTQVTEQSPKVQSRYTKESASSILASFGLSNEDLEELSRY
PDEQLTPENMPLILRDIRMRKMGRRLPNLPSQSRNKETLGSEAVSSNVIDYGHASKYG
YTEDPLEVRIYDPEIPTDEVENEFQSQQNISASVPNPNVICNSMFPVEDVFRQMDFPG
ESSNNRSFFSVESGTKMSGLHISGGQSVLEPIKSVNQSINQTVSQTMSQSLIPPSMNQ
QPFSSELISSVSQQERIPHEPVINSSNVHVGSRGSKKNYQSQADIPIRSPFGIVKASW
LPKFSHADAQKMKRLPTPSMMNDYYAASPRIFPHLCSLCNVECSHLKDWIQHQNTSTH
IESCRQLRQQYPDWNPEILPSRRNEGNRKENETPRRRSHSPSPRRSRRSSSSHRFRRS
RSPMHYMYRPRSRSPRICHRFISRYRSRSRSRSPYRIRNPFRGSPKCFRSVSPERMSR
RSVRSSDRKKALEDVVQRSGHGTEFNKQKHLEAADKGHSPAQKPKTSSGTKPSVKPTS
ATKSDSNLGGHSIRCKSKNLEDDTLSECKQVSDKAVSLQRKLRKEQSLHYGSVLLITE
LPEDGCTEEDVRKLFQPFGKVNDVLIVPYRKEAYLEMEFKEAITAIMKYIETTPLTIK
GKSVKICVPGKKKAQNKEVKKKTLESKKVSASTLKRDADASKAVEIVTSTSAGLLPTG
GGNNYPQIVLAPGLCH"
BASE COUNT 908 a 593 c 603 g 736 t
ORIGIN
1 agcggagctt tttcggcgtc gagactggag gctgagtgct aaactgtgtg gggcgcggat
61 gggatccagc tgttagtcgg ctttgtgtta ttcttggaaa atttcgcacc acttgtgaat
121 tccttgaacc tgggcattgc aaacccactt ctgttgggcc catctccttt gcactttgct
181 cagattaaga ctcagttggc gcttcagcag ctgaatgccg ttgcctcaca tggttcaaca
241 ccaccttata ctttattaaa tcaggctttc ttgaaaatag ccatgtcgag acccaggttt
301 aatcctcgag gagactttcc acttcaaagg ccacgagcac ctaacccttc tgggatgagg
361 cctccaggac catttatgag gcctggatct atgggtctcc caagatttta cccagcaggg
421 agagcacgtg gaattccaca cagatttgct ggccatgaat cttatcagaa catggggcca
481 cagagaatga atgttcaggt aactcaacac agaactgatc caagattgac caaagaaaaa
541 ctggattttc atgaagcaca acagaagaag gggaagcctc atggtagccg gtgggatgat
601 gagcctcata tatctgcatc agtggcagtg aaacagagtt ctgtaacaca ggttacagag
661 cagagtccca aagtacagag ccgctataca aaagagagtg cctcaagtat cttagcaagt
721 tttggattat ctaatgaaga cctagaagaa cttagtcgct atcctgatga acaactaact
781 cctgaaaata tgccattaat tttgagggat ataagaatgc gaaaaatggg gcgccgatta
841 cctaatttac cttctcagag cagaaataaa gaaacacttg gtagtgaagc agtttcaagt
901 aatgtgatcg attatgggca tgcaagcaaa tatggctaca cagaagatcc acttgaagta
961 cgtatttatg atcctgaaat tccaactgat gaggtcgaga atgaatttca gtcacagcag
1021 aacatttctg catctgttcc caatccaaat gtgatatgta attctatgtt tcctgttgaa
1081 gacgtatttc gccaaatgga cttccccggt gagtcctcca ataatcggtc ctttttctca
1141 gttgagagtg gaaccaagat gtcaggctta cacatttcag gaggacagtc agtccttgaa
1201 cccataaaat ccgtcaacca atccattaac caaacagtta gccagacaat gagtcaatct
1261 ctgattcctc catctatgaa ccagcaacct ttttcgtcgg aattaatttc atctgtaagc
1321 cagcaagagc ggatcccaca tgaacctgtg attaattcat ctaacgtaca tgttggatca
1381 agaggaagta aaaagaatta ccagtcacag gctgacattc ccattcggtc tccctttggt
1441 attgtgaaag catcctggct accaaagttt tcacatgctg atgcccagaa gatgaagaga
1501 cttccaactc cttctatgat gaatgattat tatgcagcat ctccaagaat atttccacat
1561 ttgtgttctc tgtgtaacgt agaatgtagt catttgaagg attggattca gcatcaaaat
1621 acatctactc atattgagag ctgtcgacag ttacgtcaac agtatcctga ttggaatcct
1681 gagatcctcc catcgagaag aaatgagggc aatagaaaag aaaatgaaac tccacgaaga
1741 cgttctcatt cccccagtcc taggcgttct agaagatcaa gctcaagtca cagattccgt
1801 cggtctcgaa gcccaatgca ttacatgtat aggccgagaa gtcgaagtcc aagaatttgc
1861 catcgtttca tttctagata cagatccaga tccagatccc gttcaccata tcgaattaga
1921 aatccattta gaggtagtcc aaaatgcttt cgatcagtta gccctgagag gatgtcaagg
1981 agatcagtga gatcatcaga tagaaaaaaa gcattagaag atgtagtaca acgatctggg
2041 catgggacag aatttaataa acagaagcat cttgaagctg ctgataaggg acattcacca
2101 gcacaaaagc ctaaaactag cagtggaaca aaaccatcag ttaaacctac aagcgctaca
2161 aagagtgatt caaatctagg aggacattct attcgttgta aatcaaagaa tcttgaagat
2221 gacactttgt cagaatgtaa acaggtgtct gataaagctg tttctctcca gcgaaagctt
2281 cggaaagaac agtcattgca ttatggttcg gttcttctta taactgaatt accagaggat
2341 ggttgtactg aagaagatgt gagaaaatta tttcaaccat ttgggaaagt gaatgatgtc
2401 ctaattgttc catatagaaa agaggcttac ctagaaatgg aatttaaaga ggcaattact
2461 gcaattatga agtacattga aacaacacct cttacgataa aaggaaaaag tgtgaaaata
2521 tgtgttccag gaaagaaaaa agcacagaac aaagaggtga agaaaaagac tttagagtca
2581 aagaaagtat ctgcatctac cttaaaaaga gatgcagatg cttcaaaagc tgttgaaatt
2641 gttacttcaa cttctgctgg actgctccct acaggcgggg gcaacaatta cccacagatt
2701 gtgttggctc caggcctttg tcattaaatc tgtactaaat aaatacaagc agctccagct
2761 tattggggct gcgttctctc ttcggcgtct ctaaggccga gcagtttcct agctgcgctc
2821 acgcaaaaaa aaaaaaaaaa
//