LOCUS BC023667 2047 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens iroquois homeobox 3, mRNA (cDNA clone MGC:29708
IMAGE:5020235), complete cds.
ACCESSION BC023667
VERSION BC023667.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2047)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2047)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023667.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: n Column: 22.
FEATURES Location/Qualifiers
source 1..2047
/db_xref="H-InvDB:HIT000050867"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29708 IMAGE:5020235"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2047
/gene="IRX3"
/gene_synonym="IRX-1"
/db_xref="GeneID:79191"
/db_xref="HGNC:HGNC:14360"
CDS 384..1889
/gene="IRX3"
/gene_synonym="IRX-1"
/codon_start=1
/product="iroquois homeobox 3"
/protein_id="AAH23667.1"
/db_xref="GeneID:79191"
/db_xref="HGNC:HGNC:14360"
/translation="MSFPQLGYQYIRPLYPSERPGAAGGSGGSAGARGGLGAGASELN
ASGSLSNVLSSVYGAPYAAAAAAAAAQGYGAFLPYAAELPIFPQLGAQYELKDSPGVQ
HPAAAAAFPHPHPAFYPYGQYQFGDPSRPKNATRESTSTLKAWLNEHRKNPYPTKGEK
IMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEEGNAYGSEREEEDEEED
EEDGKRELELEEEELGGEEEDTGGEGLADDDEDEEIDLENLDGAATEPELSLAGAARR
DGDLGLGPISDSKNSDSEDSSEGLEDRPLPVLSLAPAPPPVAVASPSLPSPPVSLDPC
APAPAPASALQKPKIWSLAETATSPDNPRRSPPGAGGSPPGAAVAPSALQLSPAAAAA
AAHRLVSAPLGKFPAWTNRPFPGPPPGPRPHPLSLLGSAPPHLLGLPGAAGHPAAAAA
FARPAEPEGGTDRCSALEVEKKLLKTAFQPVPRRPQNHLDAALVLSALSSS"
BASE COUNT 399 a 715 c 658 g 275 t
ORIGIN
1 aaggaagcga ggcgcgacac tgctggggag aggagggcag tgaggagcga ggagcgggca
61 gaggcagctc cggcggccga gaggagggag cgcggcgcag agaggagggg cttgcgcccc
121 gtagaaatgt caatcagagc ccggagcccc gggaatctcc gccaatctgt tcggacctga
181 cctggctcct cgccgccgcc ctcgccgccg ccgtcgccgc cgcggagcag atcaataggc
241 gaacgcggag cacagcgcag cgcgggcggc agcgcggccc caagcccggc ccagcccccg
301 atgcgcgccg gagcccgcgg gcggcgctga gctgggcggc ccgggggtcg ggccccctct
361 ccgtccgtgc cccgcgggcc accatgtcct tcccccagct gggataccaa tacatccgcc
421 cgctttaccc gtccgagcgc ccgggggccg ctggcggcag cggcggcagc gcgggggccc
481 ggggcggcct gggtgccgga gcctcggagc tgaacgcctc ggggtccctg tccaacgtgc
541 tctcgtccgt gtacggggcg ccctacgccg cggccgctgc ggccgccgcc gcccaaggct
601 acggcgcctt cctgccctac gccgcggagc tgcccatctt cccgcagctg ggcgcgcagt
661 atgagctgaa ggacagcccc ggggtgcagc atccggccgc ggctgccgcg tttccgcacc
721 cgcaccccgc cttctacccg tatggccagt accagttcgg ggacccgtcc cgtcccaaga
781 acgccaccag ggagagcacc agcacgctga aggcctggct caacgagcac cgcaagaacc
841 cctaccccac caagggcgag aagatcatgc tggccatcat caccaagatg accctcaccc
901 aggtgtccac ctggttcgcc aacgcgcgcc ggcgcctcaa gaaggagaat aagatgactt
961 gggcgcctcg cagccgcact gacgaggagg gaaacgctta tgggagcgag cgcgaggagg
1021 aagacgaaga ggaggacgag gaggacggca aacgcgagct agagctggag gaggaggagc
1081 tcggggggga ggaggaggac acggggggcg agggcctggc tgacgacgac gaggacgagg
1141 agatcgattt ggagaactta gacggcgcgg ccaccgagcc tgagctgtcc ctggctgggg
1201 cggcgcgcag ggatggcgac ctaggcctgg gacccatttc ggactccaaa aatagcgact
1261 cggaagatag ctctgagggc ttagaggacc ggccactacc ggtcctgagt ctggctccag
1321 cgccaccacc agtggccgtg gcctcgccgt ctctgccgtc gccccccgtg agcctggacc
1381 cctgcgctcc cgcaccagcc cccgcctccg ccctgcagaa gcccaagatc tggtccctcg
1441 cggagactgc cacaagcccg gacaacccgc gccgctcgcc tcccggcgcg ggggggtctc
1501 caccgggggc agcggtcgcg ccttccgccc tgcagctctc tccggccgcc gccgccgccg
1561 ccgctcacag actggtctca gcgccgctgg gcaagttccc ggcttggacc aaccggccgt
1621 ttccaggccc accgcccggc ccccgcccgc acccgctctc cctgctgggc tctgcccctc
1681 cgcacctgct gggacttccc ggagccgcgg gccacccggc tgccgccgcc gccttcgctc
1741 ggccagcgga gcccgaaggc ggaacagatc gctgtagtgc cttggaagtg gagaaaaagt
1801 tactcaagac agctttccag cccgtgccca ggcggcccca gaaccatctg gacgccgccc
1861 tggtcttatc ggctctctcc tcatcctagt tctttaaaaa aaacaaaaaa acaaaaaaaa
1921 ctttttttaa tcgttgtaat aattgtataa aaaaaatcgc tctgtatagt tacaacttgt
1981 aagcatgtcc gtgtataaat acctaaaagc aaaactaaac aaagaaagta aaaaaaaaaa
2041 aaaaaaa
//