LOCUS BC023659 1045 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type, 6, mRNA (cDNA clone MGC:29618 IMAGE:4869452), complete cds. ACCESSION BC023659 VERSION BC023659.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1045) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1045) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 39 Row: h Column: 10 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 23110943. FEATURES Location/Qualifiers source 1..1045 /db_xref="H-InvDB:HIT000050864" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:29618 IMAGE:4869452" /tissue_type="Skin, melanotic melanoma, high MDR." /clone_lib="NIH_MGC_49" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1045 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" CDS 79..819 /gene="PSMA6" /gene_synonym="IOTA" /gene_synonym="MGC22756" /gene_synonym="MGC2333" /gene_synonym="MGC23846" /gene_synonym="p27K" /gene_synonym="PROS27" /codon_start=1 /product="proteasome (prosome, macropain) subunit, alpha type, 6" /protein_id="AAH23659.1" /db_xref="GeneID:5687" /db_xref="HGNC:HGNC:9535" /db_xref="MIM:602855" /translation="MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRG KDCAVIVTQKKVPDKLLDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWK YKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYY CGFKATAAGVKQTESTSFLEKKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVG VVTVENPKFRILTEAEIDAHLVALAERD" BASE COUNT 351 a 195 c 237 g 262 t ORIGIN 1 cttccgggag gtgcttgtgt gcctggtgcg ggagctacgg ggcccaggga ttgtgtttaa 61 agtagtgctt gtaccaacat gtcccgtggt tccagcgccg gttttgaccg ccacattacc 121 attttttcac ccgagggtcg gctctaccaa gtagaatatg cttttaaggc tattaaccag 181 ggtggcctta catcagtagc tgtcagaggg aaagactgtg cagtaattgt cacacagaag 241 aaagtacctg acaaattatt ggattccagc acagtgactc acttattcaa gataactgaa 301 aacattggtt gtgtgatgac cggaatgaca gctgacagca gatcccaggt acagagggca 361 cgctatgagg cagctaactg gaaatacaag tatggctatg agattcctgt ggacatgctg 421 tgtaaaagaa ttgccgatat ttctcaggtc tacacacaga atgctgaaat gaggcctctt 481 ggttgttgta tgattttaat tggtatagat gaagagcaag gccctcaggt atataagtgt 541 gatcctgcag gttactactg tgggtttaaa gccactgcag cgggagttaa acaaactgag 601 tcaaccagct tccttgaaaa aaaagtgaag aagaaatttg attggacatt tgagcagaca 661 gtggaaactg caattacatg cctgtctact gttctatcaa ttgatttcaa accttcagaa 721 atagaagttg gagtagtgac agttgaaaat cctaaattca ggattcttac agaagcagag 781 attgatgctc accttgttgc tctagcagag agagactaaa cattgtcgtt agtttaccag 841 atccgtgatg ccacttacct gtgtgtttgg taacaacaaa ccaacatcat ggaggtccct 901 ggattgaaaa aggagcctct cccactcctc ctaccaccga agtggttagg actctatata 961 aataaaaaca aggcttttgg aaaataaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1021 aaaaaaaaaa aaaaaaaaaa aaaaa //