LOCUS BC023626 1451 bp mRNA linear HUM 23-DEC-2003 DEFINITION Homo sapiens Rho GTPase activating protein 4, mRNA (cDNA clone IMAGE:4766128), partial cds. ACCESSION BC023626 VERSION BC023626.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1451) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1451) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC023626.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 33 Row: l Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..1451 /db_xref="H-InvDB:HIT000090822" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4766128" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene <1..1451 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /db_xref="GeneID:393" /db_xref="MIM:300023" CDS <1..1073 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /codon_start=3 /product="ARHGAP4 protein" /protein_id="AAH23626.1" /db_xref="GeneID:393" /db_xref="MIM:300023" /translation="PLFPPDLFGELLASSELEATAERVEHVSRLLWRLPAPVLVVLRY LFTFLNHLAQYSDENMMDPYNLAVCFGPTLLPVPAGQDPVALQGRVNQLVQTLIVQPD RVFPPLTSLPGPVYEKCMAPPSASCLGDAQLESLGADNEPELEAEMPAQEDDLEGVVE AVACFAYTGRTAQELSFRRGDVLRLHERASSDWWRGEHNGMRGLIPHKYITLPAGTEK QVVGAGLQTAGESGSSPEGLLASELVHRPEPCTSPEAMGPSGHRRRCLVPASPEQHVE VDKAVAQNMDSVFKELLGKTSVRQGLGPASTTSPSPGPRSPKAPPSSRLGRNKGFSRG PGAPASPSASHPQGLDTTPKPH" misc_feature 3..308 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /note="RhoGAP; Region: GTPase-activator protein for Rho-like GTPases" /db_xref="CDD:smart00324" misc_feature 471..638 /gene="ARHGAP4" /gene_synonym="C1" /gene_synonym="KIAA0131" /gene_synonym="RGC1" /gene_synonym="RhoGAP4" /note="SH3; Region: Src homology 3 domains" /db_xref="CDD:smart00326" BASE COUNT 262 a 483 c 471 g 235 t ORIGIN 1 ccccactctt ccccccagac ctgttcggcg agctgctggc ttcttcggag ctggaggcca 61 cagcggagag ggtggagcac gtgagccgcc tgctgtggcg gctgcccgcg ccggtgctgg 121 tggttctgcg ctacctcttc accttcctca accacctggc ccagtacagc gatgagaaca 181 tgatggaccc ctacaacctg gccgtgtgct tcgggcccac gctgctaccg gtgcccgctg 241 ggcaggaccc ggtggcgctg cagggccggg tgaaccagct ggtgcagacg ctcatagtgc 301 agcccgatcg ggtcttcccg cccctgacct cgctgcctgg ccccgtctac gagaagtgca 361 tggcaccgcc ttccgccagc tgcctggggg acgcccagct ggagagcctg ggggcggaca 421 atgagccgga gctggaagcc gagatgcccg cacaggagga tgacctggag ggggtcgtgg 481 aggctgtggc ctgctttgcc tacacgggcc gcacagccca ggagctgagc ttccggcggg 541 gggacgtact gcggctgcac gagagggcct cgagcgactg gtggcggggg gagcacaacg 601 gcatgcgggg cctcatcccc cacaagtata tcacgctgcc cgccgggacg gagaagcagg 661 tggtgggcgc agggctgcag actgcagggg agtctgggag cagtcccgag ggcctcctgg 721 catcggagct ggtccaccgg ccagagccat gcacctcacc tgaggccatg ggaccctctg 781 gacacagacg acgctgcttg gtcccagcct ccccagagca acacgtggag gtggataagg 841 ctgtggcaca gaacatggac tctgtgttta aggagctctt gggaaagacc tctgtccgcc 901 agggccttgg gccagcatct accacctctc ccagtcctgg gccccgaagc ccaaaggccc 961 cgcccagcag ccgcctgggc aggaacaaag gcttctcccg gggccctggg gccccagcct 1021 caccctcagc ttcccacccc cagggcctag acacgacccc caagccacac tgaggtgccg 1081 ctgctggaga tgcgtgcccc cggcggctac ccgctggacc ggccactctc cccagccccc 1141 ttgcttctct ccagccctgt ccagcaagtg cagggtgcct gcacttcacc ctgtgcagag 1201 aggtgggatg gggccgtgca cacagggatg cccgctccac atcctgcctg cccctcagcc 1261 ctggcccagg ccccttttgg aggcagctga ggaaggatgc tggggaaagc cctcttctgc 1321 agctttgtgg aaggctgatc agtggctgct gggtggcggg tacccttgct cagatgcctg 1381 gcagggctgg gtggcgattc ataaagacct cgtgttgatt cccaaaaaaa aaaaaaaaaa 1441 aaaaaaaaaa a //