LOCUS BC023623 1802 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens chromosome 19 open reading frame 47, mRNA (cDNA clone
MGC:23442 IMAGE:4662735), complete cds.
ACCESSION BC023623
VERSION BC023623.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1802)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1802)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC023623.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP/Gazdar
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: j Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31341376.
FEATURES Location/Qualifiers
source 1..1802
/db_xref="H-InvDB:HIT000050852"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23442 IMAGE:4662735"
/tissue_type="Lung, large cell carcinoma"
/clone_lib="NIH_MGC_18"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1802
/gene="C19orf47"
/gene_synonym="FLJ36888"
/db_xref="GeneID:126526"
/db_xref="HGNC:HGNC:26723"
CDS 463..1308
/gene="C19orf47"
/gene_synonym="FLJ36888"
/codon_start=1
/product="C19orf47 protein"
/protein_id="AAH23623.1"
/db_xref="GeneID:126526"
/db_xref="HGNC:HGNC:26723"
/translation="MITNSLNHDSPPSTPPRRPDTSTSKISVTVSNKMAAKSAKATAA
LARREEESLAVPAKRRRVTAEMEGKYVINMPKGTTPRTRKILEQQQAAKGLHRTSVFD
RLGAETKADTTTGSKPTGVFSRLGATPETDEDLAWDSDNDSSSSVLQYAGVLKKLGRG
PAKASPQPALTVKAKATSSATTAAAPTLRRLALSSRSGLERKPESLSKVSIIKRLGAA
ALVPEAQDSQVTSTKSKSSAEVKVTIKRTLVGPRGSSSSEGLGAQMDHAGTVSVFKRL
GRRTF"
BASE COUNT 373 a 595 c 497 g 337 t
ORIGIN
1 agggagcagt gtcagggcca gggagacgat ggtctccgtg actatggcca cttccgagtg
61 gatccagttc tttaaggaag ccggcattcc tccaggacct gccgtcaatt atgccgtgat
121 gtttgtggat aataggattc agaagagcat gctgctggat ctcaataagg agataatgaa
181 tgagctgggc gtgaccgtgg tgggtgacat catcgccatt ctcaagcatg ccaaagtggt
241 gcaccgtcag gacatgtgca aagctgccac tgagtcagta ccctgcagcc ctagccccct
301 tgcaggcgaa attcgccgtg gcaccagtga tggagtctcc ctctgttgcc caggctggag
361 tacagtggcg cgaccttggc tcagtgcaac ctccgcctcc cgggttcaag cagttctcct
421 gcctcagcct cccgagtagc tgggattaca gctgcctccc gaatgatcac caacagcctg
481 aaccatgact ctccacccag cacacccccc aggcgcccgg acaccagcac ctccaagatc
541 tcggtcactg tgtccaacaa gatggcagca aagagtgcca aggccactgc agccctggcc
601 cgccgggagg aggagagcct ggctgttcct gccaagcggc gccgggtcac tgctgagatg
661 gaggggaagt acgtcatcaa catgcccaaa ggcaccacac cccgcacccg caagatcctg
721 gagcagcagc aggctgcaaa aggtctccat aggacgtctg tgtttgaccg cctcggcgcc
781 gagaccaagg cagacaccac gacagggagt aaacccacag gagtcttcag ccgcctgggg
841 gccaccccag aaacggacga ggatctggct tgggacagcg acaatgacag cagcagctct
901 gtcttgcagt atgccggggt cctgaagaag ctaggacggg gcccagccaa ggccagtccc
961 cagccagcac tgactgtcaa agccaaggcc acaagctcag cgacaacggc tgctgccccg
1021 acactgcggc gcctggcgct ttcctcacgg tctgggcttg agaggaagcc ggagtccttg
1081 tctaaagtca gcatcatcaa gagactgggc gcagctgccc ttgtgcccga ggcccaggac
1141 agccaggtca ccagcaccaa gagtaagtcc tcagccgagg tcaaggtcac cattaagagg
1201 actctggtgg ggccccgggg gagcagctcc agcgagggcc ttggtgccca gatggaccac
1261 gcgggcactg tgagcgtgtt caaaagactg ggccgcagga ccttctagcc cacctgtggg
1321 cggggtgcag gcagcagagc ctgcgggcat ctgccctggc cgccccaggc tcctggcttc
1381 atcacgcctc ccaccagctc ctggatgaca cagcttgtct ccctcgggct ctagagctag
1441 gcccgagcat tcgggggatc accccatttc tcctagcctg ggatggtcgt cgcagctggc
1501 ctggcctgct ccaggactcc ccttctctca tgtcctctgt gctttcttct ctggctgtgg
1561 ccttggcaga acccactttt ctacctctcc caagtgccag ggggcttctt cctctcctac
1621 attccccttc ttcccctgag cagggtctgc tgcctcagac cccagctcat cagcctccct
1681 gtccccctca actaagtggg tgtcacctgg tgggcctccc ttcccccact ccccactgac
1741 ctccctcact cctctgcgcc tccccccaca gctgctgttt taataaaaaa aaaaaaaaaa
1801 aa
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