LOCUS BC023611 2387 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens EF-hand domain family, member D2, mRNA (cDNA clone MGC:23298 IMAGE:4638660), complete cds. ACCESSION BC023611 VERSION BC023611.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2387) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2387) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 19, 2003 this sequence version replaced BC023611.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP/Gazdar cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 33 Row: d Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis. FEATURES Location/Qualifiers source 1..2387 /db_xref="H-InvDB:HIT000090812" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:23298 IMAGE:4638660" /tissue_type="Lung, large cell carcinoma" /clone_lib="NIH_MGC_18" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2387 /gene="EFHD2" /gene_synonym="MGC4342" /gene_synonym="RP3-467K16.3" /db_xref="GeneID:79180" /db_xref="HGNC:HGNC:28670" CDS 28..750 /gene="EFHD2" /gene_synonym="MGC4342" /gene_synonym="RP3-467K16.3" /codon_start=1 /product="EF-hand domain family, member D2" /protein_id="AAH23611.1" /db_xref="GeneID:79180" /db_xref="HGNC:HGNC:28670" /translation="MATDELATKLSRRLQMEGEGGGETPEQPGLNGAAAAAAGAPDEA AEALGSADCELSAKLLRRADLNQGIGEPQSPSRRVFNPYTEFKEFSRKQIKDMEKMFK QYDAGRDGFIDLMELKLMMEKLGAPQTHLGLKNMIKEVDEDFDSKLSFREFLLIFRKA AAGELQEDSGLCVLARLSEIDVSSEGVKGAKSFFEAKVQAINVSSRFEEEIKAEQEER KKQAEEMKQRKAAFKELQSTFK" BASE COUNT 483 a 741 c 716 g 447 t ORIGIN 1 gccaaggcga gtgccgcgcg ggccaccatg gccacggacg agctggccac caagctgagc 61 cggcggctgc agatggaggg cgagggcggc ggcgagaccc cggagcagcc cgggctgaac 121 ggggcagcgg cggcggcggc gggggcaccc gacgaggcgg ccgaggcgct gggcagcgcg 181 gactgcgagc tgagcgccaa gctgctgcgg cgcgcagacc tcaaccaggg catcggcgag 241 ccccagtcgc ccagccgccg cgtcttcaac ccctacaccg agttcaagga gttctccagg 301 aagcagatca aggacatgga gaagatgttc aagcagtatg atgccgggcg ggacggcttc 361 atcgacctga tggagctaaa actcatgatg gagaaacttg gggcccctca gacccacctg 421 ggcctgaaaa acatgatcaa ggaggtggat gaggactttg acagcaagct gagcttccgg 481 gagttcctcc tgatcttccg caaggcggcg gccggggagc ttcaggagga cagcgggctg 541 tgcgtgctgg cccgcctctc tgagatcgac gtctccagtg agggtgtcaa gggggccaag 601 agcttctttg aggccaaggt ccaggccatc aacgtgtcca gccgcttcga ggaggagatc 661 aaggcagagc aggaggaaag gaagaagcag gcggaggaga tgaagcagcg gaaagcggcc 721 ttcaaggagc tgcagtccac ctttaagtag cgggggctgc agccgaccgc cctgctctgg 781 ccccagtgtg gtgggcgagg gtggcgcatg ggaggccgag cctgaatcct tgcctgtgtc 841 tgacgggacc actactaaaa acctaaaaat atctgtgaat ggagcaagtt caggggtctt 901 atggaggtgg cccggcccct ccccgctccc ttccactctg cacgaggccg ccacaccggc 961 gctggctccc tgcccggccc ggccctccct ggcaatccct gggctctctt gcacccctaa 1021 ctgccccctg cctgctccgg cactgcccca ggcccagctc ctggccctag gtccctccca 1081 gccccatgtg cctgccgcct gccctccaca catccctgtc cccccaaccc gggaacccct 1141 gccctcctcc agcaggccgc accgcccctg gggccccctg ccagcccctt cccaggctgg 1201 gagacggcag aagagataga atcagggctg cccccacaga gtgggaccca aggggctaat 1261 tggaggcacg aggggacccc tccccagggc cttttcctcc tctgcgtctt ccatctactg 1321 aaatgggaga gggggtgggg agcttctgtt ctggtgaagg gacccgggca ggcccccagc 1381 accccatgct gacttggaga accccagatc tctggggccc agccaggcag ggtgtggggg 1441 cagctgtgcc aatctacctc acaggcccac cccctgccgg gcatgccgtg ggatcatggg 1501 cagggaaggc tctgggggtc ggagacaccg ctgcttagca cccccagcca gaacaccctg 1561 agggtctcgg ggctctggag agagtggggc gggaggaaga attggcacct tcctagggaa 1621 ggagacgagc gcttcgcctt gattctccga gaagcctccg agaagtgctt taagtgtgtt 1681 tgcatgcgcc aggcggtggg cagcgggggc ctgtccagcc ctctcccgcc atccttcccc 1741 aagtgacgtc cactgccttg tcaccagcga cctgcctgtc atgcccaccc cctgaggaag 1801 catggggacc ctaacaccct ggtgccctgc accagacagg ccgtggtcag gcccaggcca 1861 ccggccgggt tctgccacag cttcccacgt gcttgctgac atgcgtgtgc ctgtgtgtgg 1921 tgtctgttgc tgtgtcgtga aactgtgacc atcactcagt ccaaacaagt gagtggccct 1981 cgaggccaca gttatgcaac tttcagtgtg tgtcataacg acgtcactgc tttttaaact 2041 cgataactct ttattttagt aaaatgccca ggagtcctgg aagctacgcg gacttgcaga 2101 ggttttattt tttggcctta gaatctgcag aaattaggag gcaccgagcc cagcgcagca 2161 gcctcggacc cggattgcgt ttgccttagc ggatatgttt atacagatga atataaaatg 2221 tttttttctt tgggcttttt gcttcttttt tccccccctt ctcaccttcc cttctccccg 2281 accccacccc ccaaaaaagc tacttcttca ttccgtggta cgattatttt ttttaactaa 2341 aggaagataa aattctatat tcttaaaaaa aaaaaaaaaa aaaaaaa //