LOCUS BC023593 2048 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens X-ray repair complementing defective repair in Chinese
hamster cells 1, mRNA (cDNA clone MGC:23349 IMAGE:4646806),
complete cds.
ACCESSION BC023593
VERSION BC023593.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2048)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2048)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023593.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: f Column: 9.
FEATURES Location/Qualifiers
source 1..2048
/db_xref="H-InvDB:HIT000090804"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:23349 IMAGE:4646806"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2048
/gene="XRCC1"
/db_xref="GeneID:7515"
/db_xref="HGNC:HGNC:12828"
/db_xref="MIM:194360"
CDS 8..1909
/gene="XRCC1"
/codon_start=1
/product="X-ray repair complementing defective repair in
Chinese hamster cells 1"
/protein_id="AAH23593.1"
/db_xref="GeneID:7515"
/db_xref="HGNC:HGNC:12828"
/db_xref="MIM:194360"
/translation="MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTIS
VVLQLEKEEQIHSVDIGNDGSAFVEVLVGSSAGGAGEQDYEVLLVTSSFMSPSESRSG
SNPNRVRMFGPDKLVRAAAEKRWDRVKIVCSQPYSKDSPFGLSFVRFHSPPDKDEAEA
PSQKVTVTKLGQFRVKEEDESANSLRPGALFFSRINKTSPVTASDPAGPSYAAATLQA
SSAASSASPVSRAIGSTSKPQESPKGKRKLDLNQEEKKTPSKPPAQLSPSVPKRPKLP
APTRTPATAPVPARAQGAVTGKPRGEGTEPRRPRAGPEELGKILQGVVVVLSGFQNPF
RSELRDKALELGAKYRPDWTRDSTHLICAFANTPKYSQVLGLGGRIVRKEWVLDCHRM
RRRLPSQRYLMAGPGSSSEEDEASHSGGSGDEAPKLPQKQPQTKTKPTQAAGPSSPQK
PPTPEETKAASPVLQEDIDIEGVQSEGQDNGAEDSGDTEDELRRVAEQKEHRLPPGQE
ENGEDPYAGSTDENTDSEEHQEPPDLPVPELPDFFQGKHFFLYGEFPGDERRKLIRYV
TAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPSLAFVRPRWIYSCNEKQKLLPH
QLYGVVPQA"
BASE COUNT 544 a 590 c 573 g 341 t
ORIGIN
1 cgttgacatg ccggagatcc gcctccgcca tgtcgtgtcc tgcagcagcc aggactcgac
61 tcactgtgca gaaaatcttc tcaaggcaga cacttaccga aaatggcggg cagccaaggc
121 aggcgagaag accatctctg tggtcctaca gttggagaag gaggagcaga tacacagtgt
181 ggacattggg aatgatggct cagctttcgt ggaggtgctg gtgggcagtt cagctggagg
241 cgctggggag caagactatg aggtccttct ggtcacctca tctttcatgt ccccttccga
301 gagccgcagt ggctcaaacc ccaaccgcgt tcgcatgttt gggcctgaca agctggtccg
361 ggcagccgcc gagaagcgct gggaccgggt caaaattgtt tgcagccagc cctacagcaa
421 ggactccccc tttggcttga gttttgtacg gtttcatagc cccccagaca aagatgaggc
481 agaggccccg tcccagaagg tgacagtgac caagcttggc cagttccgtg tgaaggagga
541 ggatgagagc gccaactctc tgaggccggg ggctctcttc ttcagccgga tcaacaagac
601 atccccagtc acagccagcg acccagcagg acctagctat gcagctgcta ccctccaggc
661 ttctagtgct gcctcctcag cctctccagt ctccagggcc ataggcagca cctccaagcc
721 ccaggagtct cccaaaggga agaggaagtt ggatttgaac caagaagaaa agaagacccc
781 cagcaaacca ccagcccagc tgtcgccatc tgttcccaag agacctaaat tgccagctcc
841 aactcgtacc ccagccacag ccccagtccc tgcccgagca cagggggcag tgacaggcaa
901 accccgagga gaaggcaccg agcccagacg accccgagct ggcccagagg agctggggaa
961 gatccttcag ggtgtggtag tggtgctgag tggcttccag aaccccttcc gctccgagct
1021 gcgagataag gccctagagc ttggggccaa gtatcggcca gactggaccc gggacagcac
1081 gcacctcatc tgtgcctttg ccaacacccc caagtacagc caggtcctag gcctgggagg
1141 ccgcatcgtg cgtaaggagt gggtgctgga ctgtcaccgc atgcgtcggc ggctgccctc
1201 ccagaggtac ctcatggcag ggccaggttc cagcagtgag gaggatgagg cctctcacag
1261 cggtggcagc ggagatgaag cccccaagct tcctcagaag caaccccaga ccaaaaccaa
1321 gcccactcag gcagctggac ccagctcacc ccagaagccc ccaacccctg aagagaccaa
1381 agcagcctca ccagtgctcc aggaagatat agacattgag ggggtacagt cagaaggaca
1441 ggacaatggg gcggaagatt ctggggacac agaggatgag ctgaggaggg tggcagagca
1501 gaaggaacac agactgcccc ctggccagga ggagaatggg gaagacccgt atgcaggctc
1561 cacggatgag aacacggaca gtgaggaaca ccaggagcct cctgatctgc cagtccctga
1621 gctcccagat ttcttccagg gcaagcactt ctttctttac ggggagttcc ctggggacga
1681 gcggcggaaa ctcatccgat acgtcacagc cttcaatggg gagctcgagg actatatgag
1741 tgaccgggtt cagtttgtga tcacagcaca ggaatgggat cccagctttg aggaggccct
1801 gatggacaac ccctccctgg cattcgttcg tccccgatgg atctacagtt gcaatgagaa
1861 gcagaagtta cttcctcacc agctctatgg ggtggtgccg caggcctgaa gtatgtgcta
1921 tacacacaca cacacacaca cacacacaca cacacacacg atgcatttaa taaagatgag
1981 ttggttctca aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaa
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