LOCUS BC023582 1015 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens prostate stem cell antigen, mRNA (cDNA clone MGC:22972
IMAGE:4840974), complete cds.
ACCESSION BC023582
VERSION BC023582.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1015)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1015)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (05-FEB-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 19, 2003 this sequence version replaced BC023582.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 33 Row: m Column: 19
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 29893565.
FEATURES Location/Qualifiers
source 1..1015
/db_xref="H-InvDB:HIT000090798"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22972 IMAGE:4840974"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1015
/gene="PSCA"
/gene_synonym="PRO232"
/db_xref="GeneID:8000"
/db_xref="HGNC:HGNC:9500"
/db_xref="MIM:602470"
CDS 7..378
/gene="PSCA"
/gene_synonym="PRO232"
/codon_start=1
/product="prostate stem cell antigen"
/protein_id="AAH23582.1"
/db_xref="GeneID:8000"
/db_xref="HGNC:HGNC:9500"
/db_xref="MIM:602470"
/translation="MKAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQL
GEQCWTARIRAVGLLTVISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHALQP
AAAILALLPALGLLLWGPGQL"
BASE COUNT 224 a 329 c 280 g 182 t
ORIGIN
1 gtgaccatga aggctgtgct gcttgccctg ttgatggcag gcttggccct gcagccaggc
61 actgccctgc tgtgctactc ctgcaaagcc caggtgagca acgaggactg cctgcaggtg
121 gagaactgca cccagctggg ggagcagtgc tggaccgcgc gcatccgcgc agttggcctc
181 ctgaccgtca tcagcaaagg ctgcagcttg aactgcgtgg atgactcaca ggactactac
241 gtgggcaaga agaacatcac gtgctgtgac accgacttgt gcaacgccag cggggcccat
301 gccctgcagc cggctgccgc catccttgcg ctgctccctg cactcggcct gctgctctgg
361 ggacccggcc agctataggc tctggggggc cccgctgcag cccacactgg gtgtggtgcc
421 ccaggcctct gtgccactcc tcacagacct ggcccagtgg gagcctgtcc tggttcctga
481 ggcacatcct aacgcaagtc tgaccatgta tgtctgcacc cctgtccccc accctgaccc
541 tcccatggcc ctctccagga ctcccacccg gcagatcagc tctagtgaca cagatccgcc
601 tgcagatggc ccctccaacc ctctctgctg ctgtttccat ggcccagcat tctccaccct
661 taaccctgtg ctcaggcacc tcttccccca ggaagccttc cctgcccacc ccatctatga
721 cttgagccag gtctggtccg tggtgtcccc cgcacccagc aggggacagg cactcaggag
781 ggcccagtaa aggctgagat gaagtggact gagtagaact ggaggacaag agtcgacgtg
841 agttcctggg agtctccaga gatggggcct ggaggcctgg aggaaggggc caggcctcac
901 attcgtgggg ctccctgaat ggcagcctga gcacagcgta ggcccttaat aaacacctgt
961 tggataagcc aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//